Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 LPAL2-203ENST00000454031 2498 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 OR5M2P-202ENST00000641241 4242 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 NPM1P14-201ENST00000343743 866 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 RN7SKP1-201ENST00000365525 307 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 BEND6-201ENST00000370745 579 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AMELY-202ENST00000383036 621 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AC005040.1-201ENST00000437783 482 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 MTCO3P43-201ENST00000440974 771 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL929410.2-201ENST00000451170 189 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AC233724.10-201ENST00000510454 409 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL136520.1-202ENST00000555494 763 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 HCG18-244ENST00000602516 2890 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC079178.2-201ENST00000439323 1624 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC226101.1-201ENST00000401483 387 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CNN3P1-201ENST00000401596 935 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AL773545.3-201ENST00000414297 706 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC109638.1-201ENST00000417406 326 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC130472.1-201ENST00000427885 309 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 Z83313.1-201ENST00000433780 718 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 PHBP4-201ENST00000437447 837 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 FO393419.1-201ENST00000443746 355 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CEACAMP5-201ENST00000448037 961 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL19P-201ENST00000462522 306 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL55P-201ENST00000464534 297 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AP004833.1-201ENST00000507987 1238 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AL137802.2-201ENST00000562878 1110 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 RPAP2P1-201ENST00000603626 1168 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC011458.1-201ENST00000604034 617 ntBASIC6.92□□□□□ -1.3
AMBRA1Q9C0C7 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms