Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC087045.3-201ENST00000623046 2468 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 ZNF658B-201ENST00000602828 3408 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 RN7SKP63-201ENST00000363187 301 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 RN7SKP257-201ENST00000364525 309 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 RNA5SP396-201ENST00000364834 120 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 RN7SKP131-201ENST00000410698 301 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 RPS19P6-201ENST00000441327 433 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC008620.1-201ENST00000468453 592 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 RN7SL688P-201ENST00000471754 275 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 SSX8-201ENST00000506270 579 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC111000.1-201ENST00000514545 713 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 RNU6-751P-201ENST00000516382 101 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 AP001994.1-201ENST00000527539 826 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC138749.2-201ENST00000566048 167 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 MED31-202ENST00000574128 619 ntTSL 3 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 MIR3159-201ENST00000584572 74 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 OR5AH1P-201ENST00000595968 283 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 RPS28P1-201ENST00000604589 187 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 AL121985.3-201ENST00000620690 523 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AL391380.1-201ENST00000439300 1432 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 WNK1-220ENST00000574564 1401 ntBASIC8.78□□□□□ -1
CHMP4CQ96CF2 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
CHMP4CQ96CF2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.78□□□□□ -1
CHMP4CQ96CF2 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.77□□□□□ -1
CHMP4CQ96CF2 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CHMP4CQ96CF2 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
CHMP4CQ96CF2 AP003119.3-201ENST00000566747 4192 ntBASIC8.77□□□□□ -1
CHMP4CQ96CF2 NF1P8-201ENST00000415351 1461 ntBASIC8.77□□□□□ -1
CHMP4CQ96CF2 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
CHMP4CQ96CF2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.77□□□□□ -1
CHMP4CQ96CF2 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC105052.2-201ENST00000434317 794 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC002486.2-201ENST00000447806 590 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 NDUFB4P1-201ENST00000462398 381 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 RN7SL145P-201ENST00000469955 296 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 EGLN3P1-201ENST00000541727 720 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 BMS1P15-201ENST00000554269 1141 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC105275.2-201ENST00000567907 711 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 RN7SL657P-201ENST00000582431 293 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 RN7SL680P-201ENST00000620379 299 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 SNORA43.5-201ENST00000631270 138 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 AC233280.20-201ENST00000637412 416 ntBASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.77□□□□□ -1.01
CHMP4CQ96CF2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms