Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 RNA5SP263-201ENST00000363376 128 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 RNU6-1331P-201ENST00000363658 106 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 GAPDHP15-201ENST00000398586 975 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 OR7E91P-201ENST00000400027 866 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 RPL5P19-201ENST00000404228 893 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 CCNYL3-201ENST00000407030 998 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 LARP1P1-201ENST00000407692 292 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 SNORA79B-201ENST00000410557 148 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 RNA5SP265-201ENST00000411023 111 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 SEPHS1P1-201ENST00000426891 958 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 SNRPFP2-201ENST00000440710 251 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AL358794.1-201ENST00000445689 381 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC002366.1-201ENST00000446186 1190 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 RPL23AP23-201ENST00000452590 471 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC004263.1-201ENST00000479327 332 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 TPT1P3-201ENST00000492841 512 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC008799.1-201ENST00000495909 457 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 OR5H3P-201ENST00000502817 919 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC091982.1-201ENST00000518134 520 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 CASP1P2-201ENST00000526830 1258 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC009779.4-201ENST00000554248 611 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC010735.1-201ENST00000567305 1026 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 SNX6P1-201ENST00000601728 1224 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 CARSP1-201ENST00000603171 889 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC084876.1-201ENST00000612793 641 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC012100.3-201ENST00000624738 575 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 CFI-207ENST00000618244 1345 ntTSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 MFSD8-217ENST00000641178 4374 ntBASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
PHC3Q8NDX5 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC087392.3-202ENST00000358446 1754 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms