Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NPIPA3F8WFD2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NPIPA3F8WFD2 HDAC1P1-201ENST00000455482 1445 ntBASIC6.65□□□□□ -1.35
NPIPA3F8WFD2 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
NPIPA3F8WFD2 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPIPA3F8WFD2 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.65□□□□□ -1.35
NPIPA3F8WFD2 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC015871.4-201ENST00000624650 2260 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 SETP22-201ENST00000412243 957 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AL662791.3-201ENST00000413771 776 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC009413.1-201ENST00000414823 399 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 MICG-208ENST00000416822 132 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 OR7E117P-201ENST00000422682 1112 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 Z83313.1-201ENST00000433780 718 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 FUNDC2P2-202ENST00000443452 493 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC025271.1-201ENST00000485045 429 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC079594.1-201ENST00000489757 331 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 NDUFA3P2-201ENST00000531434 232 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 SSU72P6-201ENST00000532644 488 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 RN7SL14P-201ENST00000579715 298 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 FCGR1CP-201ENST00000579737 1127 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC097381.3-201ENST00000608962 462 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC007671.1-201ENST00000616957 830 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 HSPA8P11-201ENST00000508840 1898 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 AP003471.1-202ENST00000319051 1988 ntBASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.64□□□□□ -1.35
NPIPA3F8WFD2 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 RNU4-81P-201ENST00000363561 144 ntBASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.63□□□□□ -1.35
NPIPA3F8WFD2 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms