Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CCNHP1-201ENST00000513311 678 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AP000436.1-201ENST00000605239 800 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AL021807.1-201ENST00000607175 565 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC012488.1-201ENST00000611221 640 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 MIR6761-201ENST00000617899 72 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AP003400.2-201ENST00000624036 666 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC073488.8-201ENST00000631952 757 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 OR7E11P-202ENST00000642027 1491 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC092999.1-201ENST00000624004 1924 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 RNA5SP463-201ENST00000363030 120 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 RNA5SP355-201ENST00000365317 135 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AL139327.1-201ENST00000382988 348 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 RPL24P7-201ENST00000399435 453 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 MIR1204-201ENST00000408388 67 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC068138.1-201ENST00000412635 217 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC017104.2-201ENST00000417000 321 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC011753.4-201ENST00000417974 311 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 RPSAP59-201ENST00000421048 890 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL815P-201ENST00000470970 290 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL705P-201ENST00000481678 294 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL332P-201ENST00000482163 254 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 GCSHP1-201ENST00000512554 484 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 NPIPP1-203ENST00000547107 1071 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC063923.2-201ENST00000562158 928 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC126365.2-201ENST00000580630 379 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 GMCL1P2-201ENST00000605230 823 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AL450226.2-201ENST00000622913 439 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC073263.3-201ENST00000624449 858 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AC004808.2-201ENST00000627965 773 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 TRIM64EP-201ENST00000531233 1307 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 CR383656.5-201ENST00000547616 1340 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 AL031123.3-201ENST00000623345 1837 ntBASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
AMBRA1Q9C0C7 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
AMBRA1Q9C0C7 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms