Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC091982.1-202ENST00000473923 343 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 RN7SL797P-201ENST00000486314 297 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AP001646.2-201ENST00000528645 1156 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC090774.2-201ENST00000584708 322 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC090241.1-201ENST00000587732 621 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC068802.1-201ENST00000603420 732 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC027348.2-201ENST00000624375 642 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AC093909.6-201ENST00000624757 775 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 FTLP17-201ENST00000432567 525 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC087499.3-202ENST00000441215 1173 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC002486.2-201ENST00000447806 590 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 SNORA81.1-201ENST00000458922 177 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 RN7SL160P-201ENST00000468558 284 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 RN7SL456P-201ENST00000469290 295 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 RNA5SP75-201ENST00000516841 111 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC107952.1-201ENST00000524200 376 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC103855.4-201ENST00000533158 265 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 PDCL3P1-201ENST00000534575 734 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 PRR13P5-201ENST00000596581 442 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms