Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
FOXG1P55316 RNA5SP218-201ENST00000363188 109 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXG1P55316 GEMIN2P2-201ENST00000418195 715 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 AL359633.1-201ENST00000421403 310 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 FDPSP6-201ENST00000425091 512 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 RPL5P4-201ENST00000434805 886 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 AC234771.3-201ENST00000454984 622 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 RN7SL88P-201ENST00000480166 299 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXG1P55316 RN7SKP242-201ENST00000515967 289 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 IGLV1-62-201ENST00000518003 441 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 HNRNPCP8-201ENST00000528764 888 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 SNRPGP1-201ENST00000553864 222 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXG1P55316 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXG1P55316 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXG1P55316 MIR4470-201ENST00000583453 72 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXG1P55316 RPSAP66-201ENST00000592196 606 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXG1P55316 AC007620.3-201ENST00000608131 497 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXG1P55316 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXG1P55316 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FOXG1P55316 EPS15P1-202ENST00000459691 2071 ntBASIC6.37□□□□□ -1.39
FOXG1P55316 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXG1P55316 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXG1P55316 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
FOXG1P55316 VN2R1P-201ENST00000449668 1743 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
FOXG1P55316 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.36□□□□□ -1.39
FOXG1P55316 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.36□□□□□ -1.39
FOXG1P55316 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXG1P55316 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.36□□□□□ -1.39
FOXG1P55316 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
FOXG1P55316 U3.14-201ENST00000365363 227 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
FOXG1P55316 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 RNA5SP231-201ENST00000410496 138 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXG1P55316 EIF4A1P13-201ENST00000415667 230 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXG1P55316 AC134879.1-201ENST00000426062 394 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 MTND1P10-201ENST00000426108 832 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXG1P55316 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.36□□□□□ -1.39
FOXG1P55316 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.36□□□□□ -1.39
FOXG1P55316 RPL29P7-201ENST00000440227 457 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.36□□□□□ -1.39
FOXG1P55316 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FOXG1P55316 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 IGLVI-42-201ENST00000522485 381 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 AP003084.1-201ENST00000524828 742 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.36□□□□□ -1.39
FOXG1P55316 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXG1P55316 OR4N3P-201ENST00000559395 818 ntBASIC6.36□□□□□ -1.39
FOXG1P55316 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.36□□□□□ -1.39
FOXG1P55316 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms