Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC012629.3-201ENST00000623397 328 ntBASIC8.64□□□□□ -1.03
CHGBP05060 AP003108.4-201ENST00000623917 878 ntBASIC8.64□□□□□ -1.03
CHGBP05060 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGBP05060 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGBP05060 AC009452.1-201ENST00000640823 606 ntBASIC8.64□□□□□ -1.03
CHGBP05060 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
CHGBP05060 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHGBP05060 AL121949.2-201ENST00000403446 1548 ntBASIC8.64□□□□□ -1.03
CHGBP05060 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CHGBP05060 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CHGBP05060 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.63□□□□□ -1.03
CHGBP05060 AC013410.2-201ENST00000422627 201 ntBASIC8.63□□□□□ -1.03
CHGBP05060 ELOCP6-201ENST00000429066 328 ntBASIC8.63□□□□□ -1.03
CHGBP05060 TRIM60P13-201ENST00000432350 1283 ntBASIC8.63□□□□□ -1.03
CHGBP05060 AC009237.4-201ENST00000441078 238 ntBASIC8.63□□□□□ -1.03
CHGBP05060 AL158214.1-201ENST00000444423 404 ntBASIC8.63□□□□□ -1.03
CHGBP05060 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 ELOCP12-201ENST00000458706 328 ntBASIC8.63□□□□□ -1.03
CHGBP05060 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 GLRXP3-201ENST00000470810 321 ntBASIC8.63□□□□□ -1.03
CHGBP05060 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.63□□□□□ -1.03
CHGBP05060 AC146944.3-201ENST00000509969 371 ntBASIC8.63□□□□□ -1.03
CHGBP05060 RNU2-45P-201ENST00000516068 187 ntBASIC8.63□□□□□ -1.03
CHGBP05060 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 DCN-215ENST00000550099 719 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC8.63□□□□□ -1.03
CHGBP05060 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.63□□□□□ -1.03
CHGBP05060 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.63□□□□□ -1.03
CHGBP05060 AC027271.1-201ENST00000610270 610 ntBASIC8.63□□□□□ -1.03
CHGBP05060 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGBP05060 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGBP05060 AL136981.1-203ENST00000451452 3844 ntBASIC8.63□□□□□ -1.03
CHGBP05060 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGBP05060 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CHGBP05060 AC009948.5-201ENST00000624360 4406 ntBASIC8.62□□□□□ -1.03
CHGBP05060 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.62□□□□□ -1.03
CHGBP05060 AC007342.9-201ENST00000623877 1385 ntBASIC8.62□□□□□ -1.03
CHGBP05060 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CHGBP05060 AL139135.1-201ENST00000412675 209 ntBASIC8.62□□□□□ -1.03
CHGBP05060 AL662791.3-201ENST00000413771 776 ntBASIC8.62□□□□□ -1.03
CHGBP05060 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC8.62□□□□□ -1.03
CHGBP05060 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 GAPDHP53-201ENST00000458397 924 ntBASIC8.62□□□□□ -1.03
CHGBP05060 SNORA81.1-201ENST00000458922 177 ntBASIC8.62□□□□□ -1.03
CHGBP05060 AC091982.1-202ENST00000473923 343 ntBASIC8.62□□□□□ -1.03
CHGBP05060 SETP12-201ENST00000514068 805 ntBASIC8.62□□□□□ -1.03
CHGBP05060 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 SLC25A51P2-201ENST00000535708 889 ntBASIC8.62□□□□□ -1.03
CHGBP05060 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 SNRPGP1-201ENST00000553864 222 ntBASIC8.62□□□□□ -1.03
CHGBP05060 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.62□□□□□ -1.03
CHGBP05060 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 AL512356.3-201ENST00000623005 461 ntBASIC8.62□□□□□ -1.03
CHGBP05060 TMEM14EP-202ENST00000639378 1296 ntBASIC8.62□□□□□ -1.03
CHGBP05060 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CHGBP05060 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CHGBP05060 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms