Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.83□□□□□ -1
CHMP4CQ96CF2 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.83□□□□□ -1
CHMP4CQ96CF2 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.83□□□□□ -1
CHMP4CQ96CF2 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 UGT2B25P-201ENST00000511504 1586 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC008555.1-201ENST00000561778 2757 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AL078621.1-201ENST00000272567 768 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 RPL24P7-201ENST00000399435 453 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC127537.1-201ENST00000418183 748 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 RPL24P8-201ENST00000446071 474 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 CHIAP1-201ENST00000456220 995 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AL589765.5-201ENST00000596133 515 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 U47924.1-201ENST00000606539 434 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CHMP4CQ96CF2 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 WASF5P-205ENST00000428639 1455 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 OR52B5P-204ENST00000641744 3467 ntBASIC8.82□□□□□ -1
CHMP4CQ96CF2 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.82□□□□□ -1
CHMP4CQ96CF2 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 AC110716.2-201ENST00000563865 3945 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 SNORA73B-201ENST00000363217 204 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 SNORD15A-201ENST00000384214 148 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 AC113608.1-201ENST00000398740 305 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 GRPEL2P2-201ENST00000421856 670 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 AC114755.4-201ENST00000439114 443 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 RPS14P7-201ENST00000473701 448 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 RN7SL516P-201ENST00000496127 297 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 AC084033.1-201ENST00000550830 633 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 EIF4EBP2P2-201ENST00000563883 333 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 AC103724.4-201ENST00000605981 292 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 FAM27E3-202ENST00000614611 340 ntBASIC8.81□□□□□ -1
CHMP4CQ96CF2 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHMP4CQ96CF2 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.81□□□□□ -1
CHMP4CQ96CF2 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.8□□□□□ -1
CHMP4CQ96CF2 TRIM64EP-201ENST00000531233 1307 ntBASIC8.8□□□□□ -1
CHMP4CQ96CF2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.8□□□□□ -1
CHMP4CQ96CF2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.8□□□□□ -1
CHMP4CQ96CF2 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms