Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AL121583.1-201ENST00000612444 682 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC103564.3-201ENST00000621194 220 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AC007347.2-201ENST00000623044 180 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 AL139254.2-202ENST00000641937 1156 ntBASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
C9orf40Q8IXQ3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 AC068733.2-201ENST00000605434 1418 ntBASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 AL358913.2-201ENST00000553881 1548 ntBASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 AC090771.1-201ENST00000585803 1618 ntBASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 AC005831.1-201ENST00000624384 1697 ntBASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
C9orf40Q8IXQ3 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC008171.1-201ENST00000395058 200 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 MTND1P10-201ENST00000426108 832 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 RPS4XP19-201ENST00000460237 736 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 WBP1LP1-201ENST00000460451 896 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 MYL6P4-201ENST00000477911 453 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 RPS10P28-201ENST00000480396 498 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC146944.3-201ENST00000509969 371 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 PTTG3P-201ENST00000521862 606 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AL031846.1-201ENST00000560933 314 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 FAM30C-201ENST00000561158 410 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 RN7SL657P-201ENST00000582431 293 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC092032.1-201ENST00000603090 165 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 COX6CP16-201ENST00000603667 216 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC092960.1-201ENST00000604762 351 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC023206.1-201ENST00000605824 298 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC122710.3-201ENST00000606566 541 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC091544.5-201ENST00000620192 3815 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AL121985.2-201ENST00000621192 555 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AL356585.10-201ENST00000641883 123 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 AL391262.1-201ENST00000556558 1992 ntBASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.64□□□□□ -1.35
C9orf40Q8IXQ3 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 RNA5SP302-201ENST00000364896 100 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 SNORA70.5-201ENST00000365519 135 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 RNA5SP231-201ENST00000410496 138 ntBASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
C9orf40Q8IXQ3 PPIAP23-201ENST00000420099 497 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms