Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPS7P4-201ENST00000444127 582 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 LIN28AP2-201ENST00000445283 458 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 RN7SL751P-201ENST00000473281 284 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 OR5M4P-201ENST00000529436 925 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC005070.1-201ENST00000603744 365 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 MIR8082-201ENST00000612488 81 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC243725.1-201ENST00000637164 436 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AC233280.20-201ENST00000637412 416 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC010886.1-201ENST00000437380 2869 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 USP9YP3-201ENST00000434481 1766 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AL136298.2-201ENST00000556497 1570 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC090114.1-201ENST00000393266 448 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 ZNF37CP-201ENST00000406795 241 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 RNA5SP177-201ENST00000410122 107 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 RN7SKP137-201ENST00000411074 307 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 PPIAP23-201ENST00000420099 497 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC244505.2-201ENST00000435089 759 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AL583856.1-201ENST00000454078 1101 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 CBX5P1-201ENST00000468470 561 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 LINC01085-203ENST00000511195 326 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 IGKV2-29-201ENST00000521304 372 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AP005597.2-201ENST00000526238 341 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC103968.1-201ENST00000557841 573 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC105275.2-201ENST00000567907 711 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AP003108.4-201ENST00000623917 878 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC008555.1-201ENST00000561778 2757 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 AC091544.5-201ENST00000620192 3815 ntBASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPIPA3F8WFD2 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.66□□□□□ -1.34
NPIPA3F8WFD2 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.66□□□□□ -1.34
NPIPA3F8WFD2 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NPIPA3F8WFD2 AL445250.1-203ENST00000641829 1535 ntBASIC6.66□□□□□ -1.34
NPIPA3F8WFD2 AL136981.1-203ENST00000451452 3844 ntBASIC6.66□□□□□ -1.34
NPIPA3F8WFD2 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPIPA3F8WFD2 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms