Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AL391380.1-201ENST00000439300 1432 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 WNK1-220ENST00000574564 1401 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AL078621.1-201ENST00000272567 768 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SKP211-201ENST00000363328 315 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 EEF1GP7-201ENST00000422983 703 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 MED15P9-201ENST00000424716 533 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 RPSAP62-201ENST00000432596 833 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 RPL5P4-201ENST00000434805 886 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC108039.2-201ENST00000440214 359 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AL451074.4-201ENST00000447545 470 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC015820.1-201ENST00000473882 321 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 RPL7AP56-201ENST00000476420 791 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC013283.1-201ENST00000557282 492 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL25P-201ENST00000583862 260 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 IGLJCOR18-201ENST00000584002 424 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 OR5AH1P-201ENST00000595968 283 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 CYCSP1-201ENST00000604815 315 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AL136985.2-201ENST00000607372 535 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC005785.2-201ENST00000624655 631 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 MAPK10-365ENST00000641902 3825 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AP003471.1-202ENST00000319051 1988 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 HSPD1P4-201ENST00000547203 1702 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AL606490.2-201ENST00000457562 1330 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 TRIM64EP-201ENST00000531233 1307 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 LPAL2-203ENST00000454031 2498 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 DDX50P1-201ENST00000438163 2400 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SKP63-201ENST00000363187 301 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SKP174-201ENST00000363803 330 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RNU1-24P-201ENST00000364285 165 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 SNORD15A-201ENST00000384214 148 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 PTMAP8-201ENST00000397729 342 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SKP131-201ENST00000410698 301 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC020983.1-201ENST00000417063 543 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 AL357632.1-201ENST00000426688 643 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 EEF1A1P27-201ENST00000429983 1135 ntBASIC5.51□□□□□ -1.53
HLA-DRB4X5D2U9 GAS5-211ENST00000432536 959 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms