Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
ERCC3P19447 CENPN-204ENST00000428963 971 ntTSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC016831.3-201ENST00000446451 1723 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 RPL5P9-201ENST00000448118 886 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC106760.2-201ENST00000504159 619 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC9.01□□□□□ -0.97
ERCC3P19447 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 RNU6-319P-201ENST00000516025 108 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 OR4A9P-201ENST00000526326 944 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 OR7E2P-201ENST00000533071 889 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC9.01□□□□□ -0.97
ERCC3P19447 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 MIR3137-201ENST00000577367 75 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 OR7D1P-201ENST00000592739 933 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 AL035417.2-201ENST00000603887 796 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC008385.1-201ENST00000604421 355 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC023206.1-201ENST00000605824 298 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC087623.4-201ENST00000606593 695 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC000068.3-201ENST00000607934 427 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AL096803.3-201ENST00000609032 532 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC095038.2-201ENST00000621464 1070 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 CDYLP1-201ENST00000419017 1458 ntBASIC9.01□□□□□ -0.97
ERCC3P19447 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.01□□□□□ -0.97
ERCC3P19447 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC9.01□□□□□ -0.97
ERCC3P19447 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ERCC3P19447 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ERCC3P19447 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
ERCC3P19447 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC9□□□□□ -0.97
ERCC3P19447 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 TRAF6P1-201ENST00000429404 1558 ntBASIC9□□□□□ -0.97
ERCC3P19447 AC092646.2-201ENST00000431242 2095 ntBASIC9□□□□□ -0.97
ERCC3P19447 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC9□□□□□ -0.97
ERCC3P19447 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
ERCC3P19447 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ERCC3P19447 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC9□□□□□ -0.97
ERCC3P19447 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 OR9K2-201ENST00000305377 1122 ntBASIC9□□□□□ -0.97
ERCC3P19447 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC9□□□□□ -0.97
ERCC3P19447 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 RNU6-584P-201ENST00000410350 95 ntBASIC9□□□□□ -0.97
ERCC3P19447 VN1R31P-201ENST00000417498 730 ntBASIC9□□□□□ -0.97
ERCC3P19447 DDX11L10-201ENST00000430178 571 ntBASIC9□□□□□ -0.97
ERCC3P19447 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC9□□□□□ -0.97
ERCC3P19447 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC9□□□□□ -0.97
ERCC3P19447 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 GCNT1P5-201ENST00000449274 682 ntBASIC9□□□□□ -0.97
ERCC3P19447 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 RPL36AP55-201ENST00000454114 305 ntBASIC9□□□□□ -0.97
ERCC3P19447 RN7SL19P-201ENST00000462522 306 ntBASIC9□□□□□ -0.97
ERCC3P19447 RN7SL36P-201ENST00000469345 276 ntBASIC9□□□□□ -0.97
ERCC3P19447 AC010409.2-201ENST00000505780 478 ntBASIC9□□□□□ -0.97
ERCC3P19447 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC9□□□□□ -0.97
ERCC3P19447 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC9□□□□□ -0.97
ERCC3P19447 AP004607.5-201ENST00000532034 217 ntBASIC9□□□□□ -0.97
ERCC3P19447 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC9□□□□□ -0.97
ERCC3P19447 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ERCC3P19447 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC9□□□□□ -0.97
ERCC3P19447 AC009712.1-201ENST00000564938 316 ntBASIC9□□□□□ -0.97
ERCC3P19447 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC9□□□□□ -0.97
ERCC3P19447 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC9□□□□□ -0.97
ERCC3P19447 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC9□□□□□ -0.97
ERCC3P19447 OR7E94P-202ENST00000601375 790 ntBASIC9□□□□□ -0.97
ERCC3P19447 AL021918.1-201ENST00000603933 236 ntBASIC9□□□□□ -0.97
ERCC3P19447 FXYD6P1-201ENST00000604857 285 ntBASIC9□□□□□ -0.97
ERCC3P19447 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC9□□□□□ -0.97
ERCC3P19447 AC135050.6-202ENST00000613584 392 ntBASIC9□□□□□ -0.97
ERCC3P19447 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC9□□□□□ -0.97
ERCC3P19447 GAS2-210ENST00000630668 674 ntTSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms