Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 ADAM3B-201ENST00000569937 840 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC040162.2-201ENST00000573092 157 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX3Q99909 NDUFA3P1-201ENST00000588007 252 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX3Q99909 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 MIR6726-201ENST00000613751 61 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 MIR6736-201ENST00000616799 59 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC119674.1-201ENST00000641611 1210 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 AC092821.3-202ENST00000641304 2767 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX3Q99909 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 AL022163.1-201ENST00000430261 1569 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 MAPK10-365ENST00000641902 3825 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 RN7SKP208-201ENST00000365474 361 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 MIR106B-201ENST00000385301 82 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 IFNA12P-201ENST00000413147 571 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 BMS1P12-201ENST00000428213 706 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 AK3P5-201ENST00000432033 519 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 AC007000.1-201ENST00000453064 794 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 RN7SL213P-201ENST00000463482 317 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 RN7SL815P-201ENST00000470970 290 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 RN7SL563P-201ENST00000481233 298 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.3□□□□□ -1.4
SSX3Q99909 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 IGLV10-67-201ENST00000519446 325 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AP003385.2-201ENST00000524910 973 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC6.3□□□□□ -1.4
SSX3Q99909 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX3Q99909 RN7SL786P-201ENST00000579130 298 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC6.3□□□□□ -1.4
SSX3Q99909 RN7SL25P-201ENST00000583862 260 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 AP001120.4-201ENST00000590231 108 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 AC129492.5-201ENST00000603489 315 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX3Q99909 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SSX3Q99909 SNX18P3-202ENST00000565670 1750 ntBASIC6.3□□□□□ -1.4
SSX3Q99909 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX3Q99909 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms