Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 RN7SL180P-201ENST00000466769 294 ntBASIC8.67□□□□□ -1.02
SNED1Q8TER0 MTCYBP44-201ENST00000514835 823 ntBASIC8.67□□□□□ -1.02
SNED1Q8TER0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 AP005902.2-201ENST00000518393 307 ntBASIC8.67□□□□□ -1.02
SNED1Q8TER0 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 OR4A41P-201ENST00000533053 928 ntBASIC8.67□□□□□ -1.02
SNED1Q8TER0 AL356800.1-201ENST00000553339 735 ntBASIC8.67□□□□□ -1.02
SNED1Q8TER0 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 AC073593.1-201ENST00000624500 411 ntBASIC8.67□□□□□ -1.02
SNED1Q8TER0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNED1Q8TER0 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNED1Q8TER0 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SNED1Q8TER0 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.67□□□□□ -1.02
SNED1Q8TER0 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNED1Q8TER0 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SNED1Q8TER0 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC245291.3-201ENST00000443400 292 ntBASIC8.66□□□□□ -1.02
SNED1Q8TER0 CCNJP1-201ENST00000450600 1149 ntBASIC8.66□□□□□ -1.02
SNED1Q8TER0 PSPC1P2-201ENST00000455130 225 ntBASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC096708.2-201ENST00000577676 512 ntBASIC8.66□□□□□ -1.02
SNED1Q8TER0 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AL683826.1-201ENST00000624104 627 ntBASIC8.66□□□□□ -1.02
SNED1Q8TER0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNED1Q8TER0 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.66□□□□□ -1.02
SNED1Q8TER0 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 FAM204BP-201ENST00000369171 701 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 AL022100.1-202ENST00000421214 548 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC040975.1-201ENST00000472104 316 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 RN7SL797P-201ENST00000486314 297 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 ULK4P2-202ENST00000564187 492 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC063962.1-201ENST00000608199 521 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC127071.1-201ENST00000624997 712 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC068213.1-201ENST00000625124 226 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC8.65□□□□□ -1.02
SNED1Q8TER0 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNED1Q8TER0 AC092701.1-201ENST00000623627 1551 ntBASIC8.65□□□□□ -1.02
SNED1Q8TER0 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SNED1Q8TER0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SNED1Q8TER0 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SNED1Q8TER0 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.65□□□□□ -1.03
SNED1Q8TER0 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms