Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-1055P-201ENST00000391085 107 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 SNORA11D-201ENST00000408548 128 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 SNORA11E-201ENST00000408778 128 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 RN7SKP30-201ENST00000411373 334 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 FDPSP6-201ENST00000425091 512 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 ANXA2P2-201ENST00000435128 1020 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 RPL29P7-201ENST00000440227 457 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 PABPC1P10-201ENST00000464731 381 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 RN7SL776P-201ENST00000493390 268 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AC120036.3-201ENST00000517826 292 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AC126177.6-201ENST00000550420 1009 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 RN7SL689P-201ENST00000577215 297 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 AC016542.3-201ENST00000623520 619 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 OR7E161P-202ENST00000641994 1033 ntBASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
C9orf40Q8IXQ3 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC023886.2-201ENST00000321285 411 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 RN7SKP117-201ENST00000410175 264 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 RN7SKP85-201ENST00000411349 318 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 EIF4A1P13-201ENST00000415667 230 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AL359633.1-201ENST00000421403 310 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC134879.1-201ENST00000426062 394 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AL138479.1-201ENST00000426913 484 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC009237.4-201ENST00000441078 238 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC239800.1-201ENST00000442049 719 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC005517.1-201ENST00000452091 489 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 PSPC1P2-201ENST00000455130 225 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 RPSAP7-201ENST00000456871 885 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 VN1R6P-201ENST00000458417 907 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 LINC01085-203ENST00000511195 326 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 IGKV1D-32-201ENST00000517449 318 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 NDUFA3P2-201ENST00000531434 232 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC090971.3-201ENST00000557871 1041 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 EEF1B2P1-201ENST00000567221 672 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 AC010327.2-201ENST00000587647 488 ntBASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.67□□□□□ -1.34
C9orf40Q8IXQ3 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms