Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC023513.1-201ENST00000604396 691 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC5.03□□□□□ -1.6
RPL39P62891 AL022238.3-201ENST00000609279 443 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.03□□□□□ -1.6
RPL39P62891 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC5.03□□□□□ -1.6
RPL39P62891 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC007224.2-201ENST00000625011 510 ntBASIC5.03□□□□□ -1.6
RPL39P62891 AC241377.2-202ENST00000636462 997 ntBASIC5.03□□□□□ -1.6
RPL39P62891 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 ASNSP6-201ENST00000592770 1618 ntBASIC5.03□□□□□ -1.6
RPL39P62891 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.03□□□□□ -1.6
RPL39P62891 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RPL39P62891 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPL39P62891 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.61
RPL39P62891 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 Z93929.1-201ENST00000418200 1475 ntBASIC5.02□□□□□ -1.61
RPL39P62891 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 RBMX2P2-201ENST00000257020 946 ntBASIC5.02□□□□□ -1.61
RPL39P62891 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RPL39P62891 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RPL39P62891 AC092952.1-201ENST00000397646 1209 ntBASIC5.02□□□□□ -1.61
RPL39P62891 EEF1A1P34-201ENST00000419888 1267 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC5.02□□□□□ -1.61
RPL39P62891 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.02□□□□□ -1.61
RPL39P62891 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC5.02□□□□□ -1.61
RPL39P62891 HMGN1P6-201ENST00000438508 291 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 AL451074.4-201ENST00000447545 470 ntBASIC5.02□□□□□ -1.61
RPL39P62891 EAF2-202ENST00000451944 960 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 RN7SL414P-201ENST00000469545 294 ntBASIC5.02□□□□□ -1.61
RPL39P62891 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 RN7SL241P-201ENST00000482973 236 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC5.02□□□□□ -1.61
RPL39P62891 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC5.02□□□□□ -1.61
RPL39P62891 OR6M3P-201ENST00000531567 700 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC5.02□□□□□ -1.61
RPL39P62891 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.02□□□□□ -1.61
RPL39P62891 RBM22P13-201ENST00000569805 1244 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AC015818.6-201ENST00000584274 634 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC5.02□□□□□ -1.61
RPL39P62891 AL021918.1-201ENST00000603933 236 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AC019322.2-201ENST00000605634 147 ntBASIC5.02□□□□□ -1.61
RPL39P62891 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC5.02□□□□□ -1.61
RPL39P62891 AL731533.2-201ENST00000607898 578 ntBASIC5.02□□□□□ -1.61
RPL39P62891 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.02□□□□□ -1.61
RPL39P62891 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 AL596275.2-208ENST00000641192 594 ntBASIC5.02□□□□□ -1.61
RPL39P62891 MARK2P10-201ENST00000454959 1437 ntBASIC5.02□□□□□ -1.61
RPL39P62891 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 AP000866.6-201ENST00000638898 3579 ntBASIC5.02□□□□□ -1.61
RPL39P62891 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC5.02□□□□□ -1.61
RPL39P62891 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
RPL39P62891 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPL39P62891 USP48-203ENST00000374732 3037 ntTSL 2 BASIC5.02□□□□□ -1.61
RPL39P62891 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 DDX43P1-201ENST00000510713 1763 ntBASIC5.01□□□□□ -1.61
RPL39P62891 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.01□□□□□ -1.61
RPL39P62891 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RPL39P62891 AL139805.2-201ENST00000455305 2433 ntBASIC5.01□□□□□ -1.61
RPL39P62891 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RPL39P62891 AL391380.1-201ENST00000439300 1432 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms