Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.71□□□□□ -1.34
SSX4O60224 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 AC007262.1-201ENST00000604099 321 ntBASIC6.71□□□□□ -1.34
SSX4O60224 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX4O60224 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX4O60224 AC005383.1-201ENST00000622689 534 ntBASIC6.71□□□□□ -1.34
SSX4O60224 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.71□□□□□ -1.34
SSX4O60224 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.71□□□□□ -1.34
SSX4O60224 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
SSX4O60224 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SSX4O60224 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.71□□□□□ -1.34
SSX4O60224 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 SSXP3-201ENST00000442971 1300 ntBASIC6.71□□□□□ -1.34
SSX4O60224 AC073342.2-201ENST00000595842 1800 ntBASIC6.71□□□□□ -1.34
SSX4O60224 LCOR-201ENST00000286067 4542 ntBASIC6.71□□□□□ -1.34
SSX4O60224 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
SSX4O60224 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSX4O60224 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX4O60224 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX4O60224 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 RNVU1-15-201ENST00000384476 165 ntBASIC6.7□□□□□ -1.34
SSX4O60224 MIR640-201ENST00000385086 96 ntBASIC6.7□□□□□ -1.34
SSX4O60224 AL035698.1-201ENST00000405812 564 ntBASIC6.7□□□□□ -1.34
SSX4O60224 RN7SKP261-201ENST00000410948 278 ntBASIC6.7□□□□□ -1.34
SSX4O60224 GRPEL2P2-201ENST00000421856 670 ntBASIC6.7□□□□□ -1.34
SSX4O60224 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 CR391992.1-201ENST00000438601 394 ntBASIC6.7□□□□□ -1.34
SSX4O60224 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 AC004692.1-201ENST00000455430 424 ntBASIC6.7□□□□□ -1.34
SSX4O60224 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 AC018475.1-201ENST00000478358 465 ntBASIC6.7□□□□□ -1.34
SSX4O60224 RN7SL869P-201ENST00000497032 300 ntBASIC6.7□□□□□ -1.34
SSX4O60224 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 AP003385.2-201ENST00000524910 973 ntBASIC6.7□□□□□ -1.34
SSX4O60224 UBE2Q2P11-201ENST00000559691 205 ntBASIC6.7□□□□□ -1.34
SSX4O60224 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 AC133569.1-201ENST00000564327 373 ntBASIC6.7□□□□□ -1.34
SSX4O60224 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSX4O60224 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX4O60224 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 AC016582.3-206ENST00000636547 207 ntBASIC6.7□□□□□ -1.34
SSX4O60224 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX4O60224 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 AP000866.6-201ENST00000638898 3579 ntBASIC6.7□□□□□ -1.34
SSX4O60224 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX4O60224 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX4O60224 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SSX4O60224 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 MFSD8-227ENST00000641393 4069 ntBASIC6.69□□□□□ -1.34
SSX4O60224 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.69□□□□□ -1.34
SSX4O60224 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SSX4O60224 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 SNORA10-201ENST00000384084 133 ntBASIC6.69□□□□□ -1.34
SSX4O60224 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SSX4O60224 AC092952.1-201ENST00000397646 1209 ntBASIC6.69□□□□□ -1.34
SSX4O60224 RPL12P10-201ENST00000413498 498 ntBASIC6.69□□□□□ -1.34
SSX4O60224 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX4O60224 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX4O60224 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.69□□□□□ -1.34
SSX4O60224 RPSAP62-201ENST00000432596 833 ntBASIC6.69□□□□□ -1.34
SSX4O60224 AC231532.1-201ENST00000438584 312 ntBASIC6.69□□□□□ -1.34
SSX4O60224 RPSAP49-201ENST00000445182 886 ntBASIC6.69□□□□□ -1.34
SSX4O60224 AC092421.1-201ENST00000448148 418 ntBASIC6.69□□□□□ -1.34
SSX4O60224 GCNT1P5-201ENST00000449274 682 ntBASIC6.69□□□□□ -1.34
SSX4O60224 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.69□□□□□ -1.34
SSX4O60224 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.69□□□□□ -1.34
SSX4O60224 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms