Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 AL136140.2-201ENST00000624717 1705 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 AC027279.4-201ENST00000624371 2072 ntBASIC7.87□□□□□ -1.15
NID1P14543 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NID1P14543 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 AL139274.1-201ENST00000402374 936 ntBASIC7.87□□□□□ -1.15
NID1P14543 MTCYBP38-201ENST00000417160 1123 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.87□□□□□ -1.15
NID1P14543 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 USP9YP31-201ENST00000431405 881 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 AL355149.1-201ENST00000438396 882 ntBASIC7.87□□□□□ -1.15
NID1P14543 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.87□□□□□ -1.15
NID1P14543 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC7.87□□□□□ -1.15
NID1P14543 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 AC234781.3-201ENST00000452540 973 ntBASIC7.87□□□□□ -1.15
NID1P14543 AL450023.2-201ENST00000453276 545 ntBASIC7.87□□□□□ -1.15
NID1P14543 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.87□□□□□ -1.15
NID1P14543 AC079203.1-201ENST00000487972 404 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.87□□□□□ -1.15
NID1P14543 OR5H5P-201ENST00000503164 928 ntBASIC7.87□□□□□ -1.15
NID1P14543 ASS1P8-201ENST00000504437 647 ntBASIC7.87□□□□□ -1.15
NID1P14543 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.87□□□□□ -1.15
NID1P14543 HMGB1P47-201ENST00000511281 589 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC067904.2-201ENST00000517322 1283 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 AC118273.2-201ENST00000532092 465 ntBASIC7.87□□□□□ -1.15
NID1P14543 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 AC013452.1-201ENST00000560630 598 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC090695.1-201ENST00000561269 1222 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 AC091304.4-201ENST00000565703 620 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC093249.5-201ENST00000568120 430 ntBASIC7.87□□□□□ -1.15
NID1P14543 HLA-P-207ENST00000568192 747 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC233699.1-201ENST00000569955 1168 ntBASIC7.87□□□□□ -1.15
NID1P14543 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC7.87□□□□□ -1.15
NID1P14543 AP005229.1-201ENST00000592198 810 ntTSL 3 BASIC7.87□□□□□ -1.15
NID1P14543 VN1R90P-201ENST00000595717 726 ntBASIC7.87□□□□□ -1.15
NID1P14543 BNIP3P33-201ENST00000598912 569 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC008751.1-201ENST00000600438 342 ntBASIC7.87□□□□□ -1.15
NID1P14543 AL022324.3-201ENST00000609330 747 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC022079.2-201ENST00000619739 566 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC009878.1-201ENST00000621819 340 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC006328.2-201ENST00000623198 397 ntBASIC7.87□□□□□ -1.15
NID1P14543 AC012005.2-201ENST00000624333 397 ntBASIC7.87□□□□□ -1.15
NID1P14543 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 HLA-B-257ENST00000640094 147 ntBASIC7.87□□□□□ -1.15
NID1P14543 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NID1P14543 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC7.87□□□□□ -1.15
NID1P14543 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NID1P14543 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC7.87□□□□□ -1.15
NID1P14543 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC7.87□□□□□ -1.15
NID1P14543 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NID1P14543 XRCC6P4-201ENST00000518193 2067 ntBASIC7.87□□□□□ -1.15
NID1P14543 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NID1P14543 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC7.86□□□□□ -1.15
NID1P14543 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC7.86□□□□□ -1.15
NID1P14543 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NID1P14543 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NID1P14543 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NID1P14543 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.86□□□□□ -1.15
NID1P14543 CR381670.1-201ENST00000624291 1693 ntBASIC7.86□□□□□ -1.15
NID1P14543 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms