Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 PGM5P4-201ENST00000421970 445 ntBASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 CYP21A1P-202ENST00000354927 1481 ntBASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.34■□□□□ 0.85
CHMP2BQ9UQN3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 TERF1P5-201ENST00000477545 1207 ntBASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 AC010536.3-201ENST00000620306 533 ntBASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP2BQ9UQN3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.84
CHMP2BQ9UQN3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 AL591742.1-201ENST00000604433 565 ntBASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP2BQ9UQN3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 AC016405.3-201ENST00000607710 860 ntBASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms