Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX41Q9UJV9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
DDX41Q9UJV9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 POM121L13P-201ENST00000422362 380 ntBASIC22.99■■□□□ 1.27
DDX41Q9UJV9 UBE2SP1-201ENST00000450587 669 ntBASIC22.99■■□□□ 1.27
DDX41Q9UJV9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 Z98882.1-201ENST00000622160 2253 ntBASIC22.99■■□□□ 1.27
DDX41Q9UJV9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX41Q9UJV9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 AC069544.1-201ENST00000609399 999 ntBASIC22.98■■□□□ 1.27
DDX41Q9UJV9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX41Q9UJV9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 RPS2P4-201ENST00000476944 856 ntBASIC22.97■■□□□ 1.27
DDX41Q9UJV9 C1QBPP2-201ENST00000528754 825 ntBASIC22.97■■□□□ 1.27
DDX41Q9UJV9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX41Q9UJV9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX41Q9UJV9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
DDX41Q9UJV9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX41Q9UJV9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX41Q9UJV9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms