Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 AC006970.2-201ENST00000450065 779 ntBASIC25.26■■□□□ 1.63
CHMP4BQ9H444 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.25■■□□□ 1.63
CHMP4BQ9H444 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 BX276092.2-201ENST00000417668 665 ntBASIC25.24■■□□□ 1.63
CHMP4BQ9H444 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHMP4BQ9H444 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 AC112907.3-201ENST00000577781 2400 ntBASIC25.23■■□□□ 1.63
CHMP4BQ9H444 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.23■■□□□ 1.63
CHMP4BQ9H444 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.23■■□□□ 1.63
CHMP4BQ9H444 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHMP4BQ9H444 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 AC083906.2-201ENST00000511578 360 ntBASIC25.22■■□□□ 1.63
CHMP4BQ9H444 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHMP4BQ9H444 AL691432.2-201ENST00000607222 2038 ntBASIC25.22■■□□□ 1.63
CHMP4BQ9H444 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 STX6-204ENST00000542060 4809 ntTSL 2 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.21■■□□□ 1.63
CHMP4BQ9H444 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHMP4BQ9H444 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms