Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 AL512604.3-201ENST00000569583 964 ntBASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 AP000692.2-201ENST00000608391 879 ntBASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRFN3Q9BTN0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
LRFN3Q9BTN0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.14■□□□□ 0.81
LRFN3Q9BTN0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 AC087742.1-201ENST00000575880 1738 ntBASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 AC092338.2-201ENST00000568827 1415 ntBASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 ABCB10P4-201ENST00000566803 2184 ntBASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 AC004980.1-204ENST00000429707 299 ntBASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 AC142381.3-201ENST00000568208 1670 ntBASIC20.13■□□□□ 0.81
LRFN3Q9BTN0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 AC004951.3-201ENST00000418645 1148 ntBASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 AC079781.3-201ENST00000449110 356 ntBASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRFN3Q9BTN0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 MIR1233-2-201ENST00000408138 82 ntBASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 MIR1233-1-201ENST00000408722 82 ntBASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 MFAP1P1-201ENST00000442257 1255 ntBASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 AC106795.1-205ENST00000512851 1056 ntBASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.11■□□□□ 0.81
LRFN3Q9BTN0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRFN3Q9BTN0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms