Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNX1Q96RV3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCNX1Q96RV3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 AL121603.2-201ENST00000557373 2117 ntBASIC17.69■□□□□ 0.42
PCNX1Q96RV3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 MMP23A-201ENST00000234610 1017 ntBASIC17.69■□□□□ 0.42
PCNX1Q96RV3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCNX1Q96RV3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
PCNX1Q96RV3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCNX1Q96RV3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 KSR1P1-201ENST00000446298 240 ntBASIC17.67■□□□□ 0.42
PCNX1Q96RV3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCNX1Q96RV3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 NIFKP9-201ENST00000419265 221 ntBASIC17.66■□□□□ 0.42
PCNX1Q96RV3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.66■□□□□ 0.42
PCNX1Q96RV3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 KRT16P1-201ENST00000399124 1418 ntBASIC17.66■□□□□ 0.42
PCNX1Q96RV3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 AC023632.3-201ENST00000521633 145 ntBASIC17.66■□□□□ 0.42
PCNX1Q96RV3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCNX1Q96RV3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms