Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.76■■□□□ 1.71
SMARCC1Q92922 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SMARCC1Q92922 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC1Q92922 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SMARCC1Q92922 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 AC087388.1-201ENST00000571370 1112 ntBASIC25.75■■□□□ 1.71
SMARCC1Q92922 AP005242.2-201ENST00000580065 1175 ntBASIC25.75■■□□□ 1.71
SMARCC1Q92922 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.75■■□□□ 1.71
SMARCC1Q92922 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC1Q92922 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMARCC1Q92922 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
SMARCC1Q92922 MESTP1-201ENST00000404287 994 ntBASIC25.74■■□□□ 1.71
SMARCC1Q92922 LIN28AP1-201ENST00000429574 405 ntBASIC25.74■■□□□ 1.71
SMARCC1Q92922 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.74■■□□□ 1.71
SMARCC1Q92922 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.74■■□□□ 1.71
SMARCC1Q92922 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SMARCC1Q92922 AL445675.2-201ENST00000620291 557 ntBASIC25.74■■□□□ 1.71
SMARCC1Q92922 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SMARCC1Q92922 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.74■■□□□ 1.71
SMARCC1Q92922 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMARCC1Q92922 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.73■■□□□ 1.71
SMARCC1Q92922 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SMARCC1Q92922 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SMARCC1Q92922 EGLN1P1-201ENST00000531623 762 ntBASIC25.73■■□□□ 1.71
SMARCC1Q92922 C1QL1P1-201ENST00000568105 661 ntBASIC25.73■■□□□ 1.71
SMARCC1Q92922 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.73■■□□□ 1.71
SMARCC1Q92922 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SMARCC1Q92922 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.73■■□□□ 1.71
SMARCC1Q92922 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.72■■□□□ 1.71
SMARCC1Q92922 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 DGCR10-201ENST00000609839 495 ntBASIC25.72■■□□□ 1.71
SMARCC1Q92922 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
SMARCC1Q92922 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SMARCC1Q92922 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
SMARCC1Q92922 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC1Q92922 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC1Q92922 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC1Q92922 TSPY14P-201ENST00000303979 915 ntBASIC25.71■■□□□ 1.71
SMARCC1Q92922 ATP5G1P1-201ENST00000448724 379 ntBASIC25.71■■□□□ 1.71
SMARCC1Q92922 WWOX-216ENST00000569818 525 ntBASIC25.71■■□□□ 1.71
SMARCC1Q92922 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.71■■□□□ 1.71
SMARCC1Q92922 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SMARCC1Q92922 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.71■■□□□ 1.71
SMARCC1Q92922 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.71■■□□□ 1.71
SMARCC1Q92922 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC1Q92922 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.7■■□□□ 1.71
SMARCC1Q92922 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SMARCC1Q92922 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC1Q92922 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.7■■□□□ 1.7
SMARCC1Q92922 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC1Q92922 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC1Q92922 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.7■■□□□ 1.7
SMARCC1Q92922 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.7■■□□□ 1.7
SMARCC1Q92922 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.7■■□□□ 1.7
SMARCC1Q92922 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.7■■□□□ 1.7
SMARCC1Q92922 AC006011.2-201ENST00000621313 1158 ntBASIC25.7■■□□□ 1.7
SMARCC1Q92922 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.7■■□□□ 1.7
SMARCC1Q92922 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC1Q92922 AC244015.2-201ENST00000616358 1861 ntBASIC25.7■■□□□ 1.7
SMARCC1Q92922 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC1Q92922 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.7■■□□□ 1.7
SMARCC1Q92922 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
SMARCC1Q92922 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SMARCC1Q92922 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.69■■□□□ 1.7
SMARCC1Q92922 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.69■■□□□ 1.7
SMARCC1Q92922 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC1Q92922 ECEL1P1-201ENST00000373592 1742 ntBASIC25.68■■□□□ 1.7
SMARCC1Q92922 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms