Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.53■■□□□ 1.52
SNED1Q8TER0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
SNED1Q8TER0 AC026271.3-201ENST00000571884 352 ntBASIC24.53■■□□□ 1.52
SNED1Q8TER0 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.53■■□□□ 1.52
SNED1Q8TER0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.53■■□□□ 1.52
SNED1Q8TER0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.53■■□□□ 1.52
SNED1Q8TER0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.53■■□□□ 1.52
SNED1Q8TER0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNED1Q8TER0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNED1Q8TER0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 AP005242.2-201ENST00000580065 1175 ntBASIC24.52■■□□□ 1.52
SNED1Q8TER0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNED1Q8TER0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNED1Q8TER0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SNED1Q8TER0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.52■■□□□ 1.52
SNED1Q8TER0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.52■■□□□ 1.51
SNED1Q8TER0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.51■■□□□ 1.51
SNED1Q8TER0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.51■■□□□ 1.51
SNED1Q8TER0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.51■■□□□ 1.51
SNED1Q8TER0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
SNED1Q8TER0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNED1Q8TER0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.5■■□□□ 1.51
SNED1Q8TER0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SNED1Q8TER0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.5■■□□□ 1.51
SNED1Q8TER0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.5■■□□□ 1.51
SNED1Q8TER0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
SNED1Q8TER0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNED1Q8TER0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.49■■□□□ 1.51
SNED1Q8TER0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.49■■□□□ 1.51
SNED1Q8TER0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SNED1Q8TER0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 MYC-208ENST00000641036 567 ntBASIC24.49■■□□□ 1.51
SNED1Q8TER0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
SNED1Q8TER0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNED1Q8TER0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.49■■□□□ 1.51
SNED1Q8TER0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.49■■□□□ 1.51
SNED1Q8TER0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SNED1Q8TER0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.48■■□□□ 1.51
SNED1Q8TER0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNED1Q8TER0 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.48■■□□□ 1.51
SNED1Q8TER0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.48■■□□□ 1.51
SNED1Q8TER0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SNED1Q8TER0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNED1Q8TER0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
SNED1Q8TER0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNED1Q8TER0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNED1Q8TER0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SNED1Q8TER0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 DGCR10-201ENST00000609839 495 ntBASIC24.47■■□□□ 1.51
SNED1Q8TER0 AL445675.2-201ENST00000620291 557 ntBASIC24.47■■□□□ 1.51
SNED1Q8TER0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SNED1Q8TER0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.47■■□□□ 1.51
SNED1Q8TER0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SNED1Q8TER0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms