Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 KRT8P10-201ENST00000450021 1447 ntBASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 AC011506.1-201ENST00000474329 610 ntBASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 AC097488.1-201ENST00000507834 756 ntBASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ALMS1Q8TCU4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 AC116407.4-201ENST00000623319 1061 ntBASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 AC011558.1-201ENST00000623459 338 ntBASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 PVRIG2P-201ENST00000435460 978 ntBASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 AC128688.1-201ENST00000487626 519 ntBASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.59□□□□□ -0.23
ALMS1Q8TCU4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
ALMS1Q8TCU4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
ALMS1Q8TCU4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
ALMS1Q8TCU4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ALMS1Q8TCU4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ALMS1Q8TCU4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.23
ALMS1Q8TCU4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 TSPY5P-201ENST00000426936 936 ntBASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ALMS1Q8TCU4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 AC083849.1-201ENST00000615227 514 ntBASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms