Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 KRT8P20-201ENST00000423953 1409 ntBASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CBWD3Q5JTY5 AC125437.2-201ENST00000625180 2167 ntBASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 AC091874.3-201ENST00000512672 1195 ntBASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 AL109923.1-201ENST00000618799 583 ntBASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CBWD3Q5JTY5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.64■■□□□ 1.06
CBWD3Q5JTY5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CBWD3Q5JTY5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.64■■□□□ 1.06
CBWD3Q5JTY5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 AC104771.1-201ENST00000603335 964 ntBASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CBWD3Q5JTY5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 AC023632.3-201ENST00000521633 145 ntBASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBWD3Q5JTY5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 MYC-209ENST00000641252 345 ntBASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CBWD3Q5JTY5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms