Protein–RNA interactions for Protein: Q04272

VPS20, Vacuolar protein sorting-associated protein 20, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS20Q04272 SGF11YPL047W 300 nt0.45□□□□□ -2.34
VPS20Q04272 YPL225WYPL225W 441 nt0.45□□□□□ -2.34
VPS20Q04272 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
VPS20Q04272 PET111YMR257C 2403 nt0.44□□□□□ -2.34
VPS20Q04272 YHL046W-AYHL046W-A 327 nt0.44□□□□□ -2.34
VPS20Q04272 YHR007C-AYHR007C-A 216 nt0.44□□□□□ -2.34
VPS20Q04272 tW(UCA)QtW(UCA)Q 74 nt0.44□□□□□ -2.34
VPS20Q04272 COX5BYIL111W 456 nt0.43□□□□□ -2.34
VPS20Q04272 YJL120WYJL120W 324 nt0.43□□□□□ -2.34
VPS20Q04272 TAR1YLR154W-C 375 nt0.43□□□□□ -2.34
VPS20Q04272 YLR399W-AYLR399W-A 105 nt0.43□□□□□ -2.34
VPS20Q04272 YPR160W-AYPR160W-A 81 nt0.43□□□□□ -2.34
VPS20Q04272 YAR053WYAR053W 297 nt0.42□□□□□ -2.34
VPS20Q04272 HUG1YML058W-A 207 nt0.42□□□□□ -2.34
VPS20Q04272 YDL185C-AYDL185C-A 228 nt0.41□□□□□ -2.34
VPS20Q04272 SBH1YER087C-B 249 nt0.41□□□□□ -2.34
VPS20Q04272 Q0144Q0144 330 nt0.41□□□□□ -2.34
VPS20Q04272 YOR192C-BYOR192C-B 5313 nt0.41□□□□□ -2.34
VPS20Q04272 MLP1YKR095W 5628 nt0.4□□□□□ -2.34
VPS20Q04272 RPL35AYDL191W 363 nt0.4□□□□□ -2.35
VPS20Q04272 HTB2YBL002W 396 nt0.4□□□□□ -2.35
VPS20Q04272 VIK1YPL253C 1944 nt0.39□□□□□ -2.35
VPS20Q04272 YMR321CYMR321C 318 nt0.39□□□□□ -2.35
VPS20Q04272 BEM3YPL115C 3387 nt0.39□□□□□ -2.35
VPS20Q04272 SSS1YDR086C 243 nt0.38□□□□□ -2.35
VPS20Q04272 PRP5YBR237W 2550 nt0.38□□□□□ -2.35
VPS20Q04272 ULP2YIL031W 3105 nt0.38□□□□□ -2.35
VPS20Q04272 YSP1YHR155W 3687 nt0.37□□□□□ -2.35
VPS20Q04272 YCR018C-AYCR018C-A 255 nt0.37□□□□□ -2.35
VPS20Q04272 YAL067W-AYAL067W-A 228 nt0.37□□□□□ -2.35
VPS20Q04272 PRP42YDR235W 1635 nt0.36□□□□□ -2.35
VPS20Q04272 OST4YDL232W 111 nt0.36□□□□□ -2.35
VPS20Q04272 PAU12YGR294W 363 nt0.36□□□□□ -2.35
VPS20Q04272 YAL068W-AYAL068W-A 255 nt0.36□□□□□ -2.35
VPS20Q04272 BIL1YOR304C-A 231 nt0.36□□□□□ -2.35
VPS20Q04272 snR190snR190 190 nt0.35□□□□□ -2.35
VPS20Q04272 HAL9YOL089C 3093 nt0.35□□□□□ -2.35
VPS20Q04272 YIL115W-AYIL115W-A 372 nt0.34□□□□□ -2.36
VPS20Q04272 YLR222C-AYLR222C-A 231 nt0.34□□□□□ -2.36
VPS20Q04272 YMR307C-AYMR307C-A 195 nt0.34□□□□□ -2.36
VPS20Q04272 YOR345CYOR345C 351 nt0.34□□□□□ -2.36
VPS20Q04272 YDR354C-AYDR354C-A 144 nt0.32□□□□□ -2.36
VPS20Q04272 tN(GUU)QtN(GUU)Q 71 nt0.32□□□□□ -2.36
VPS20Q04272 ABF2YMR072W 552 nt0.32□□□□□ -2.36
VPS20Q04272 YKL145W-AYKL145W-A 93 nt0.31□□□□□ -2.36
VPS20Q04272 YAL063C-AYAL063C-A 291 nt0.31□□□□□ -2.36
VPS20Q04272 COG8YML071C 1824 nt0.31□□□□□ -2.36
VPS20Q04272 YDR048CYDR048C 315 nt0.3□□□□□ -2.36
VPS20Q04272 YLR154W-FYLR154W-F 141 nt0.29□□□□□ -2.36
VPS20Q04272 YGR035CYGR035C 351 nt0.28□□□□□ -2.36
VPS20Q04272 ORC3YLL004W 1851 nt0.27□□□□□ -2.37
VPS20Q04272 VAR1Q0140 1197 nt0.26□□□□□ -2.37
VPS20Q04272 RPS27BYHR021C 249 nt0.26□□□□□ -2.37
VPS20Q04272 CSE2YNR010W 450 nt0.26□□□□□ -2.37
VPS20Q04272 YNL054W-BYNL054W-B 5250 nt0.25□□□□□ -2.37
VPS20Q04272 YJL026C-AYJL026C-A 222 nt0.25□□□□□ -2.37
VPS20Q04272 YKL136WYKL136W 399 nt0.25□□□□□ -2.37
VPS20Q04272 YPR016W-AYPR016W-A 261 nt0.25□□□□□ -2.37
VPS20Q04272 YPR092WYPR092W 306 nt0.25□□□□□ -2.37
VPS20Q04272 MLP2YIL149C 5040 nt0.25□□□□□ -2.37
VPS20Q04272 IQG1YPL242C 4488 nt0.25□□□□□ -2.37
VPS20Q04272 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)BtF(GAA)B 73 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)FtF(GAA)F 73 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)GtF(GAA)G 73 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)H1tF(GAA)H1 73 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)H2tF(GAA)H2 73 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)MtF(GAA)M 73 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)P1tF(GAA)P1 73 nt0.24□□□□□ -2.37
VPS20Q04272 tF(GAA)P2tF(GAA)P2 73 nt0.24□□□□□ -2.37
VPS20Q04272 ULI1YFR026C 510 nt0.24□□□□□ -2.37
VPS20Q04272 NNF2YGR089W 2811 nt0.23□□□□□ -2.37
VPS20Q04272 YDR371C-AYDR371C-A 105 nt0.23□□□□□ -2.37
VPS20Q04272 BIR1YJR089W 2865 nt0.22□□□□□ -2.37
VPS20Q04272 COY1YKL179C 2040 nt0.22□□□□□ -2.37
VPS20Q04272 YLR282CYLR282C 342 nt0.22□□□□□ -2.37
VPS20Q04272 YOR161W-AYOR161W-A 81 nt0.22□□□□□ -2.37
VPS20Q04272 RPS26AYGL189C 360 nt0.21□□□□□ -2.38
VPS20Q04272 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
VPS20Q04272 UTP20YBL004W 7482 nt0.21□□□□□ -2.38
VPS20Q04272 YDR118W-AYDR118W-A 117 nt0.2□□□□□ -2.38
VPS20Q04272 RCO1YMR075W 2055 nt0.2□□□□□ -2.38
VPS20Q04272 YDR157WYDR157W 402 nt0.19□□□□□ -2.38
VPS20Q04272 TRS65YGR166W 1683 nt0.18□□□□□ -2.38
VPS20Q04272 YAF9YNL107W 681 nt0.18□□□□□ -2.38
VPS20Q04272 AI1Q0050 2505 nt0.18□□□□□ -2.38
VPS20Q04272 YCR022CYCR022C 345 nt0.17□□□□□ -2.38
VPS20Q04272 snR60snR60 104 nt0.17□□□□□ -2.38
VPS20Q04272 YNL146WYNL146W 303 nt0.17□□□□□ -2.38
VPS20Q04272 YBL100W-BYBL100W-B 5313 nt0.16□□□□□ -2.38
VPS20Q04272 YEL020C-BYEL020C-B 198 nt0.16□□□□□ -2.38
VPS20Q04272 BUL2YML111W 2763 nt0.15□□□□□ -2.39
VPS20Q04272 YDR102CYDR102C 333 nt0.14□□□□□ -2.39
VPS20Q04272 YGR069WYGR069W 336 nt0.14□□□□□ -2.39
VPS20Q04272 BLI1YKL061W 342 nt0.14□□□□□ -2.39
VPS20Q04272 YLL019W-AYLL019W-A 93 nt0.14□□□□□ -2.39
VPS20Q04272 NIP1YMR309C 2439 nt0.13□□□□□ -2.39
VPS20Q04272 YKL100W-AYKL100W-A 90 nt0.13□□□□□ -2.39
VPS20Q04272 YOR015WYOR015W 360 nt0.13□□□□□ -2.39
VPS20Q04272 YOR186C-AYOR186C-A 210 nt0.13□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms