Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CACNA2D1P54289 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.24■□□□□ 0.99
CACNA2D1P54289 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 DPP3P2-201ENST00000416030 1696 ntBASIC21.23■□□□□ 0.99
CACNA2D1P54289 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.23■□□□□ 0.99
CACNA2D1P54289 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CACNA2D1P54289 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 AC023632.3-201ENST00000521633 145 ntBASIC21.22■□□□□ 0.99
CACNA2D1P54289 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 AC069544.1-201ENST00000609399 999 ntBASIC21.22■□□□□ 0.99
CACNA2D1P54289 AC120498.8-201ENST00000614275 531 ntBASIC21.22■□□□□ 0.99
CACNA2D1P54289 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.22■□□□□ 0.99
CACNA2D1P54289 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CACNA2D1P54289 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 AC092720.2-201ENST00000602388 1665 ntBASIC21.21■□□□□ 0.99
CACNA2D1P54289 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 AC124283.5-201ENST00000624661 1809 ntBASIC21.21■□□□□ 0.99
CACNA2D1P54289 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CACNA2D1P54289 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 POM121L13P-201ENST00000422362 380 ntBASIC21.21■□□□□ 0.99
CACNA2D1P54289 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CACNA2D1P54289 GCSHP5-201ENST00000443090 522 ntBASIC21.21■□□□□ 0.99
CACNA2D1P54289 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CACNA2D1P54289 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CACNA2D1P54289 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CACNA2D1P54289 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.21■□□□□ 0.99
CACNA2D1P54289 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CACNA2D1P54289 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CACNA2D1P54289 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CACNA2D1P54289 AC073314.1-201ENST00000568729 2216 ntBASIC21.2■□□□□ 0.98
CACNA2D1P54289 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CACNA2D1P54289 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CACNA2D1P54289 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CACNA2D1P54289 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CACNA2D1P54289 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CACNA2D1P54289 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CACNA2D1P54289 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 AL390719.1-204ENST00000412397 1219 ntBASIC21.19■□□□□ 0.98
CACNA2D1P54289 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CACNA2D1P54289 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.19■□□□□ 0.98
CACNA2D1P54289 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms