Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
LIMK2P53671 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.19■□□□□ 0.82
LIMK2P53671 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.18■□□□□ 0.82
LIMK2P53671 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.18■□□□□ 0.82
LIMK2P53671 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LIMK2P53671 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIMK2P53671 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.18■□□□□ 0.82
LIMK2P53671 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.18■□□□□ 0.82
LIMK2P53671 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.18■□□□□ 0.82
LIMK2P53671 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LIMK2P53671 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LIMK2P53671 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.18■□□□□ 0.82
LIMK2P53671 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.18■□□□□ 0.82
LIMK2P53671 MIR4651-201ENST00000582622 73 ntBASIC20.18■□□□□ 0.82
LIMK2P53671 AC092118.2-201ENST00000613495 667 ntBASIC20.18■□□□□ 0.82
LIMK2P53671 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LIMK2P53671 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LIMK2P53671 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
LIMK2P53671 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.18■□□□□ 0.82
LIMK2P53671 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.18■□□□□ 0.82
LIMK2P53671 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.17■□□□□ 0.82
LIMK2P53671 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.17■□□□□ 0.82
LIMK2P53671 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LIMK2P53671 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LIMK2P53671 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.17■□□□□ 0.82
LIMK2P53671 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LIMK2P53671 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.17■□□□□ 0.82
LIMK2P53671 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LIMK2P53671 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.17■□□□□ 0.82
LIMK2P53671 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.17■□□□□ 0.82
LIMK2P53671 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.17■□□□□ 0.82
LIMK2P53671 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.17■□□□□ 0.82
LIMK2P53671 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LIMK2P53671 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LIMK2P53671 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LIMK2P53671 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.17■□□□□ 0.82
LIMK2P53671 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.17■□□□□ 0.82
LIMK2P53671 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.17■□□□□ 0.82
LIMK2P53671 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.17■□□□□ 0.82
LIMK2P53671 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
LIMK2P53671 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
LIMK2P53671 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LIMK2P53671 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LIMK2P53671 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIMK2P53671 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIMK2P53671 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIMK2P53671 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.15■□□□□ 0.82
LIMK2P53671 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LIMK2P53671 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LIMK2P53671 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.15■□□□□ 0.82
LIMK2P53671 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LIMK2P53671 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIMK2P53671 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LIMK2P53671 BX276092.2-201ENST00000417668 665 ntBASIC20.15■□□□□ 0.82
LIMK2P53671 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LIMK2P53671 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.15■□□□□ 0.82
LIMK2P53671 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.15■□□□□ 0.82
LIMK2P53671 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.15■□□□□ 0.82
LIMK2P53671 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LIMK2P53671 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIMK2P53671 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LIMK2P53671 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LIMK2P53671 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.14■□□□□ 0.82
LIMK2P53671 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LIMK2P53671 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LIMK2P53671 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 AC125437.2-201ENST00000625180 2167 ntBASIC20.14■□□□□ 0.81
LIMK2P53671 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 FAM201B-201ENST00000458407 597 ntBASIC20.14■□□□□ 0.81
LIMK2P53671 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.14■□□□□ 0.81
LIMK2P53671 RARRES2P4-201ENST00000514074 484 ntBASIC20.14■□□□□ 0.81
LIMK2P53671 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.14■□□□□ 0.81
LIMK2P53671 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.14■□□□□ 0.81
LIMK2P53671 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LIMK2P53671 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.14■□□□□ 0.81
LIMK2P53671 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIMK2P53671 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms