Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.93■□□□□ 0.62
CLK3P49761 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.93■□□□□ 0.62
CLK3P49761 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.93■□□□□ 0.62
CLK3P49761 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.92■□□□□ 0.62
CLK3P49761 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLK3P49761 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLK3P49761 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLK3P49761 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLK3P49761 AC069236.1-201ENST00000604339 616 ntBASIC18.92■□□□□ 0.62
CLK3P49761 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLK3P49761 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLK3P49761 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.92■□□□□ 0.62
CLK3P49761 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
CLK3P49761 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLK3P49761 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLK3P49761 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLK3P49761 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLK3P49761 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.91■□□□□ 0.62
CLK3P49761 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.91■□□□□ 0.62
CLK3P49761 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.91■□□□□ 0.62
CLK3P49761 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.91■□□□□ 0.62
CLK3P49761 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLK3P49761 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLK3P49761 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLK3P49761 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CLK3P49761 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CLK3P49761 TCF3P1-201ENST00000423021 1937 ntBASIC18.9■□□□□ 0.62
CLK3P49761 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 AC026185.1-201ENST00000445748 174 ntBASIC18.9■□□□□ 0.62
CLK3P49761 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.9■□□□□ 0.62
CLK3P49761 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.9■□□□□ 0.62
CLK3P49761 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 AC073111.5-205ENST00000641717 521 ntBASIC18.9■□□□□ 0.62
CLK3P49761 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.9■□□□□ 0.62
CLK3P49761 AC116562.4-201ENST00000641316 2276 ntBASIC18.9■□□□□ 0.62
CLK3P49761 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.9■□□□□ 0.62
CLK3P49761 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLK3P49761 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLK3P49761 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLK3P49761 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLK3P49761 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLK3P49761 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.89■□□□□ 0.62
CLK3P49761 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CLK3P49761 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLK3P49761 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.89■□□□□ 0.61
CLK3P49761 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.89■□□□□ 0.61
CLK3P49761 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.89■□□□□ 0.61
CLK3P49761 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLK3P49761 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.89■□□□□ 0.61
CLK3P49761 FAM21FP-204ENST00000608637 956 ntBASIC18.89■□□□□ 0.61
CLK3P49761 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.89■□□□□ 0.61
CLK3P49761 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLK3P49761 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms