Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ERCC3P19447 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.19■■□□□ 1.3
ERCC3P19447 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.19■■□□□ 1.3
ERCC3P19447 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ERCC3P19447 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.19■■□□□ 1.3
ERCC3P19447 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ERCC3P19447 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.19■■□□□ 1.3
ERCC3P19447 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.19■■□□□ 1.3
ERCC3P19447 AC027702.1-201ENST00000563810 1770 ntBASIC23.19■■□□□ 1.3
ERCC3P19447 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ERCC3P19447 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ERCC3P19447 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
ERCC3P19447 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.18■■□□□ 1.3
ERCC3P19447 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.18■■□□□ 1.3
ERCC3P19447 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.18■■□□□ 1.3
ERCC3P19447 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.18■■□□□ 1.3
ERCC3P19447 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.18■■□□□ 1.3
ERCC3P19447 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.18■■□□□ 1.3
ERCC3P19447 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.18■■□□□ 1.3
ERCC3P19447 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 AL121603.2-201ENST00000557373 2117 ntBASIC23.18■■□□□ 1.3
ERCC3P19447 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ERCC3P19447 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ERCC3P19447 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.17■■□□□ 1.3
ERCC3P19447 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.17■■□□□ 1.3
ERCC3P19447 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.17■■□□□ 1.3
ERCC3P19447 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ERCC3P19447 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ERCC3P19447 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.17■■□□□ 1.3
ERCC3P19447 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.17■■□□□ 1.3
ERCC3P19447 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.17■■□□□ 1.3
ERCC3P19447 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.17■■□□□ 1.3
ERCC3P19447 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
ERCC3P19447 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.17■■□□□ 1.3
ERCC3P19447 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ERCC3P19447 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.17■■□□□ 1.3
ERCC3P19447 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
ERCC3P19447 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ERCC3P19447 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ERCC3P19447 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
ERCC3P19447 MIR1224-201ENST00000408193 85 ntBASIC23.16■■□□□ 1.3
ERCC3P19447 AC023632.3-201ENST00000521633 145 ntBASIC23.16■■□□□ 1.3
ERCC3P19447 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.16■■□□□ 1.3
ERCC3P19447 AL355075.4-201ENST00000554988 638 ntBASIC23.16■■□□□ 1.3
ERCC3P19447 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.16■■□□□ 1.3
ERCC3P19447 AL121829.2-201ENST00000620908 328 ntBASIC23.16■■□□□ 1.3
ERCC3P19447 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 AC124283.5-201ENST00000624661 1809 ntBASIC23.16■■□□□ 1.3
ERCC3P19447 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 KRT8P36-201ENST00000489121 1440 ntBASIC23.16■■□□□ 1.3
ERCC3P19447 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.16■■□□□ 1.3
ERCC3P19447 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ERCC3P19447 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.16■■□□□ 1.3
ERCC3P19447 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ERCC3P19447 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ERCC3P19447 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ERCC3P19447 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ERCC3P19447 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ERCC3P19447 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ERCC3P19447 AC087499.1-201ENST00000418141 1075 ntBASIC23.15■■□□□ 1.3
ERCC3P19447 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.15■■□□□ 1.3
ERCC3P19447 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ERCC3P19447 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.15■■□□□ 1.3
ERCC3P19447 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
ERCC3P19447 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ERCC3P19447 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.15■■□□□ 1.3
ERCC3P19447 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.14■■□□□ 1.3
ERCC3P19447 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ERCC3P19447 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
ERCC3P19447 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ERCC3P19447 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
ERCC3P19447 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ERCC3P19447 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.14■■□□□ 1.29
ERCC3P19447 KRT18P21-201ENST00000515767 1272 ntBASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms