Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.27■■□□□ 1
CHRNB2P17787 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.27■■□□□ 1
CHRNB2P17787 MKRN4P-201ENST00000444706 1521 ntBASIC21.27■■□□□ 1
CHRNB2P17787 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHRNB2P17787 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CHRNB2P17787 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.26■□□□□ 0.99
CHRNB2P17787 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.26■□□□□ 0.99
CHRNB2P17787 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.26■□□□□ 0.99
CHRNB2P17787 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.26■□□□□ 0.99
CHRNB2P17787 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.26■□□□□ 0.99
CHRNB2P17787 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.26■□□□□ 0.99
CHRNB2P17787 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRNB2P17787 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
CHRNB2P17787 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHRNB2P17787 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 LSM12P1-201ENST00000411836 588 ntBASIC21.25■□□□□ 0.99
CHRNB2P17787 KRT8P20-201ENST00000423953 1409 ntBASIC21.25■□□□□ 0.99
CHRNB2P17787 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.25■□□□□ 0.99
CHRNB2P17787 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.25■□□□□ 0.99
CHRNB2P17787 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.25■□□□□ 0.99
CHRNB2P17787 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CHRNB2P17787 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRNB2P17787 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.25■□□□□ 0.99
CHRNB2P17787 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.25■□□□□ 0.99
CHRNB2P17787 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHRNB2P17787 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
CHRNB2P17787 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 BX276092.2-201ENST00000417668 665 ntBASIC21.24■□□□□ 0.99
CHRNB2P17787 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.24■□□□□ 0.99
CHRNB2P17787 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHRNB2P17787 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.24■□□□□ 0.99
CHRNB2P17787 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.24■□□□□ 0.99
CHRNB2P17787 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.24■□□□□ 0.99
CHRNB2P17787 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHRNB2P17787 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.24■□□□□ 0.99
CHRNB2P17787 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHRNB2P17787 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHRNB2P17787 GPX1P1-201ENST00000388829 606 ntBASIC21.23■□□□□ 0.99
CHRNB2P17787 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.23■□□□□ 0.99
CHRNB2P17787 AC083906.2-201ENST00000511578 360 ntBASIC21.23■□□□□ 0.99
CHRNB2P17787 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.23■□□□□ 0.99
CHRNB2P17787 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CHRNB2P17787 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.23■□□□□ 0.99
CHRNB2P17787 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHRNB2P17787 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.22■□□□□ 0.99
CHRNB2P17787 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CHRNB2P17787 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRNB2P17787 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 GUSBP6-202ENST00000438529 1198 ntBASIC21.22■□□□□ 0.99
CHRNB2P17787 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 AC023632.3-201ENST00000521633 145 ntBASIC21.22■□□□□ 0.99
CHRNB2P17787 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CHRNB2P17787 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRNB2P17787 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNB2P17787 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRNB2P17787 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms