Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 YJR141WYJR141W 1044 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 YNL319WYNL319W 441 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 DIE2YGR227W 1578 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 YCR018C-AYCR018C-A 255 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 YCR022CYCR022C 345 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 YIR030W-AYIR030W-A 384 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 BER1YLR412W 825 nt-0.5□□□□□ -2.49
TY4B-HP0C2J7 SDH7YDR511W 402 nt-0.51□□□□□ -2.49
TY4B-HP0C2J7 YCR001WYCR001W 315 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 YDL011CYDL011C 324 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 YGL230CYGL230C 444 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 tN(GUU)QtN(GUU)Q 71 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 YHR131W-AYHR131W-A 246 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 TAR1YLR154W-C 375 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 IPP1YBR011C 864 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 YPL182CYPL182C 384 nt-0.52□□□□□ -2.49
TY4B-HP0C2J7 YKL044WYKL044W 321 nt-0.53□□□□□ -2.49
TY4B-HP0C2J7 YLR334CYLR334C 381 nt-0.55□□□□□ -2.5
TY4B-HP0C2J7 YPL205CYPL205C 345 nt-0.55□□□□□ -2.5
TY4B-HP0C2J7 YBR223W-AYBR223W-A 120 nt-0.55□□□□□ -2.5
TY4B-HP0C2J7 YNL058CYNL058C 951 nt-0.56□□□□□ -2.5
TY4B-HP0C2J7 SGF11YPL047W 300 nt-0.56□□□□□ -2.5
TY4B-HP0C2J7 HMLALPHA2YCL067C 633 nt-0.57□□□□□ -2.5
TY4B-HP0C2J7 MATALPHA2YCR039C 633 nt-0.57□□□□□ -2.5
TY4B-HP0C2J7 HMRA2YCR096C 360 nt-0.57□□□□□ -2.5
TY4B-HP0C2J7 RPS25BYLR333C 327 nt-0.57□□□□□ -2.5
TY4B-HP0C2J7 MND1YGL183C 660 nt-0.58□□□□□ -2.5
TY4B-HP0C2J7 SCEIQ0160 708 nt-0.58□□□□□ -2.5
TY4B-HP0C2J7 PCF11YDR228C 1881 nt-0.59□□□□□ -2.5
TY4B-HP0C2J7 YBL071CYBL071C 309 nt-0.59□□□□□ -2.5
TY4B-HP0C2J7 YJL120WYJL120W 324 nt-0.6□□□□□ -2.51
TY4B-HP0C2J7 YNL067W-BYNL067W-B 141 nt-0.6□□□□□ -2.51
TY4B-HP0C2J7 YBR099CYBR099C 384 nt-0.6□□□□□ -2.51
TY4B-HP0C2J7 YCR038W-AYCR038W-A 126 nt-0.61□□□□□ -2.51
TY4B-HP0C2J7 RPF1YHR088W 888 nt-0.61□□□□□ -2.51
TY4B-HP0C2J7 YHR138CYHR138C 345 nt-0.61□□□□□ -2.51
TY4B-HP0C2J7 YPR092WYPR092W 306 nt-0.61□□□□□ -2.51
TY4B-HP0C2J7 YPL068CYPL068C 882 nt-0.62□□□□□ -2.51
TY4B-HP0C2J7 YJR087WYJR087W 351 nt-0.63□□□□□ -2.51
TY4B-HP0C2J7 snR33snR33 183 nt-0.63□□□□□ -2.51
TY4B-HP0C2J7 YCR100CYCR100C 951 nt-0.64□□□□□ -2.51
TY4B-HP0C2J7 YDR426CYDR426C 378 nt-0.64□□□□□ -2.51
TY4B-HP0C2J7 YLR287CYLR287C 1068 nt-0.64□□□□□ -2.51
TY4B-HP0C2J7 YPR002C-AYPR002C-A 198 nt-0.64□□□□□ -2.51
TY4B-HP0C2J7 FYV7YLR068W 456 nt-0.66□□□□□ -2.51
TY4B-HP0C2J7 YIL029CYIL029C 429 nt-0.67□□□□□ -2.52
TY4B-HP0C2J7 YLR282CYLR282C 342 nt-0.67□□□□□ -2.52
TY4B-HP0C2J7 SNU13YEL026W 381 nt-0.68□□□□□ -2.52
TY4B-HP0C2J7 YHR007C-AYHR007C-A 216 nt-0.68□□□□□ -2.52
TY4B-HP0C2J7 YPL229WYPL229W 621 nt-0.68□□□□□ -2.52
TY4B-HP0C2J7 YIL071W-AYIL071W-A 477 nt-0.69□□□□□ -2.52
TY4B-HP0C2J7 YKL083WYKL083W 615 nt-0.69□□□□□ -2.52
TY4B-HP0C2J7 EST1YLR233C 2100 nt-0.69□□□□□ -2.52
TY4B-HP0C2J7 YML007C-AYML007C-A 111 nt-0.69□□□□□ -2.52
TY4B-HP0C2J7 YMR158W-BYMR158W-B 321 nt-0.69□□□□□ -2.52
TY4B-HP0C2J7 YNL303WYNL303W 348 nt-0.69□□□□□ -2.52
TY4B-HP0C2J7 YLR041WYLR041W 321 nt-0.7□□□□□ -2.52
TY4B-HP0C2J7 YBR072C-AYBR072C-A 162 nt-0.7□□□□□ -2.52
TY4B-HP0C2J7 MRPS8YMR158W 468 nt-0.71□□□□□ -2.52
TY4B-HP0C2J7 tA(UGC)QtA(UGC)Q 76 nt-0.71□□□□□ -2.52
TY4B-HP0C2J7 ZEO1YOL109W 342 nt-0.71□□□□□ -2.52
TY4B-HP0C2J7 YJL047C-AYJL047C-A 135 nt-0.73□□□□□ -2.53
TY4B-HP0C2J7 BLI1YKL061W 342 nt-0.73□□□□□ -2.53
TY4B-HP0C2J7 GRX5YPL059W 453 nt-0.74□□□□□ -2.53
TY4B-HP0C2J7 YAL066WYAL066W 309 nt-0.75□□□□□ -2.53
TY4B-HP0C2J7 YDL016CYDL016C 303 nt-0.76□□□□□ -2.53
TY4B-HP0C2J7 YDR354C-AYDR354C-A 144 nt-0.77□□□□□ -2.53
TY4B-HP0C2J7 AGA2YGL032C 264 nt-0.77□□□□□ -2.53
TY4B-HP0C2J7 YGL123C-AYGL123C-A 231 nt-0.77□□□□□ -2.53
TY4B-HP0C2J7 YDR366CYDR366C 399 nt-0.78□□□□□ -2.53
TY4B-HP0C2J7 YOR192C-CYOR192C-C 237 nt-0.78□□□□□ -2.53
TY4B-HP0C2J7 YLR456WYLR456W 615 nt-0.78□□□□□ -2.53
TY4B-HP0C2J7 AIM29YKR074W 468 nt-0.8□□□□□ -2.54
TY4B-HP0C2J7 YAR047CYAR047C 321 nt-0.81□□□□□ -2.54
TY4B-HP0C2J7 YOL038C-AYOL038C-A 96 nt-0.81□□□□□ -2.54
TY4B-HP0C2J7 YAR029WYAR029W 225 nt-0.82□□□□□ -2.54
TY4B-HP0C2J7 SDH6YDR379C-A 240 nt-0.82□□□□□ -2.54
TY4B-HP0C2J7 YML100W-AYML100W-A 174 nt-0.82□□□□□ -2.54
TY4B-HP0C2J7 snR36snR36 182 nt-0.82□□□□□ -2.54
TY4B-HP0C2J7 PAU9YBL108C-A 129 nt-0.84□□□□□ -2.54
TY4B-HP0C2J7 YER079WYER079W 633 nt-0.85□□□□□ -2.54
TY4B-HP0C2J7 YIL002W-AYIL002W-A 210 nt-0.85□□□□□ -2.54
TY4B-HP0C2J7 COG6YNL041C 2520 nt-0.85□□□□□ -2.55
TY4B-HP0C2J7 YKL100W-AYKL100W-A 90 nt-0.86□□□□□ -2.55
TY4B-HP0C2J7 YOR161W-AYOR161W-A 81 nt-0.86□□□□□ -2.55
TY4B-HP0C2J7 YDL007C-AYDL007C-A 258 nt-0.87□□□□□ -2.55
TY4B-HP0C2J7 YGR174W-AYGR174W-A 87 nt-0.87□□□□□ -2.55
TY4B-HP0C2J7 YLR269CYLR269C 351 nt-0.87□□□□□ -2.55
TY4B-HP0C2J7 YFL012WYFL012W 447 nt-0.88□□□□□ -2.55
TY4B-HP0C2J7 YHR125WYHR125W 306 nt-0.89□□□□□ -2.55
TY4B-HP0C2J7 GPI15YNL038W 690 nt-0.89□□□□□ -2.55
TY4B-HP0C2J7 YEL020C-BYEL020C-B 198 nt-0.9□□□□□ -2.55
TY4B-HP0C2J7 YLR264C-AYLR264C-A 117 nt-0.9□□□□□ -2.55
TY4B-HP0C2J7 YPR010C-AYPR010C-A 219 nt-0.9□□□□□ -2.55
TY4B-HP0C2J7 PCC1YKR095W-A 267 nt-0.91□□□□□ -2.55
TY4B-HP0C2J7 snR54snR54 86 nt-0.91□□□□□ -2.55
TY4B-HP0C2J7 YHR130CYHR130C 336 nt-0.92□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 52.4 ms