Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.88
LTN1O94822 AC121338.2-201ENST00000622535 1744 ntBASIC26.76■■□□□ 1.88
LTN1O94822 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
LTN1O94822 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LTN1O94822 CYP2D8P-201ENST00000433633 1490 ntBASIC26.76■■□□□ 1.87
LTN1O94822 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LTN1O94822 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC26.76■■□□□ 1.87
LTN1O94822 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
LTN1O94822 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC26.76■■□□□ 1.87
LTN1O94822 AC026271.3-201ENST00000571884 352 ntBASIC26.76■■□□□ 1.87
LTN1O94822 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
LTN1O94822 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
LTN1O94822 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC26.76■■□□□ 1.87
LTN1O94822 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
LTN1O94822 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LTN1O94822 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC26.75■■□□□ 1.87
LTN1O94822 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
LTN1O94822 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC26.75■■□□□ 1.87
LTN1O94822 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LTN1O94822 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
LTN1O94822 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LTN1O94822 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC26.75■■□□□ 1.87
LTN1O94822 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC26.75■■□□□ 1.87
LTN1O94822 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LTN1O94822 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LTN1O94822 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.75■■□□□ 1.87
LTN1O94822 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.75■■□□□ 1.87
LTN1O94822 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
LTN1O94822 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 MIR1238-201ENST00000408483 83 ntBASIC26.74■■□□□ 1.87
LTN1O94822 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.74■■□□□ 1.87
LTN1O94822 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.74■■□□□ 1.87
LTN1O94822 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC26.74■■□□□ 1.87
LTN1O94822 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 AC005229.4-201ENST00000610085 2198 ntBASIC26.74■■□□□ 1.87
LTN1O94822 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC26.74■■□□□ 1.87
LTN1O94822 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
LTN1O94822 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.74■■□□□ 1.87
LTN1O94822 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.74■■□□□ 1.87
LTN1O94822 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26.74■■□□□ 1.87
LTN1O94822 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.74■■□□□ 1.87
LTN1O94822 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC26.74■■□□□ 1.87
LTN1O94822 SLC25A3P1-201ENST00000443844 931 ntBASIC26.74■■□□□ 1.87
LTN1O94822 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LTN1O94822 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LTN1O94822 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
LTN1O94822 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.73■■□□□ 1.87
LTN1O94822 TERF1P1-201ENST00000311003 1181 ntBASIC26.73■■□□□ 1.87
LTN1O94822 AC005521.1-201ENST00000393351 872 ntBASIC26.73■■□□□ 1.87
LTN1O94822 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC26.73■■□□□ 1.87
LTN1O94822 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
LTN1O94822 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LTN1O94822 AC010947.1-201ENST00000623454 693 ntBASIC26.73■■□□□ 1.87
LTN1O94822 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
LTN1O94822 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LTN1O94822 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
LTN1O94822 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.72■■□□□ 1.87
LTN1O94822 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
LTN1O94822 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LTN1O94822 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC26.72■■□□□ 1.87
LTN1O94822 ABBA01031674.1-201ENST00000635145 728 ntBASIC26.72■■□□□ 1.87
LTN1O94822 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LTN1O94822 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.72■■□□□ 1.87
LTN1O94822 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LTN1O94822 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LTN1O94822 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
LTN1O94822 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC26.71■■□□□ 1.87
LTN1O94822 AF106564.1-201ENST00000607058 2553 ntBASIC26.71■■□□□ 1.87
LTN1O94822 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.71■■□□□ 1.87
LTN1O94822 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
LTN1O94822 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.71■■□□□ 1.87
LTN1O94822 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.71■■□□□ 1.87
LTN1O94822 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LTN1O94822 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.71■■□□□ 1.87
LTN1O94822 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LTN1O94822 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LTN1O94822 HLA-G-202ENST00000376815 851 ntBASIC26.71■■□□□ 1.87
LTN1O94822 HLA-G-203ENST00000376818 1127 ntBASIC26.71■■□□□ 1.87
LTN1O94822 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.71■■□□□ 1.87
LTN1O94822 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC26.71■■□□□ 1.87
LTN1O94822 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.71■■□□□ 1.87
LTN1O94822 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.71■■□□□ 1.87
LTN1O94822 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC26.71■■□□□ 1.87
LTN1O94822 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
LTN1O94822 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LTN1O94822 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
LTN1O94822 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
LTN1O94822 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
LTN1O94822 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.7■■□□□ 1.86
LTN1O94822 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC26.7■■□□□ 1.86
LTN1O94822 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
LTN1O94822 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.7■■□□□ 1.86
LTN1O94822 PLK5-205ENST00000642079 1969 ntBASIC26.7■■□□□ 1.86
LTN1O94822 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.7■■□□□ 1.86
LTN1O94822 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms