Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF4O60810 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF4O60810 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF4O60810 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF4O60810 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.29■□□□□ 0.68
PRAMEF4O60810 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF4O60810 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PRAMEF4O60810 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEF4O60810 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.28■□□□□ 0.68
PRAMEF4O60810 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEF4O60810 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.28■□□□□ 0.68
PRAMEF4O60810 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.28■□□□□ 0.68
PRAMEF4O60810 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF4O60810 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEF4O60810 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAMEF4O60810 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF4O60810 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF4O60810 AC090192.1-201ENST00000517740 490 ntBASIC19.27■□□□□ 0.68
PRAMEF4O60810 AC098934.4-201ENST00000564127 592 ntBASIC19.27■□□□□ 0.68
PRAMEF4O60810 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF4O60810 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.27■□□□□ 0.67
PRAMEF4O60810 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 DUSP5P2-201ENST00000426873 1033 ntBASIC19.26■□□□□ 0.67
PRAMEF4O60810 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF4O60810 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF4O60810 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 AL138781.1-201ENST00000566567 1274 ntBASIC19.25■□□□□ 0.67
PRAMEF4O60810 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 AC092118.2-201ENST00000613495 667 ntBASIC19.25■□□□□ 0.67
PRAMEF4O60810 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF4O60810 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF4O60810 KRT8P20-201ENST00000423953 1409 ntBASIC19.25■□□□□ 0.67
PRAMEF4O60810 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF4O60810 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms