Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC7O00311 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC7O00311 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC7O00311 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC7O00311 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.67■□□□□ 0.74
CDC7O00311 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC7O00311 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC7O00311 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC7O00311 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.66■□□□□ 0.74
CDC7O00311 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 AL512625.2-201ENST00000417533 625 ntBASIC19.66■□□□□ 0.74
CDC7O00311 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.66■□□□□ 0.74
CDC7O00311 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 AL050303.2-201ENST00000619798 666 ntBASIC19.66■□□□□ 0.74
CDC7O00311 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDC7O00311 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC7O00311 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDC7O00311 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.65■□□□□ 0.74
CDC7O00311 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC7O00311 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.65■□□□□ 0.74
CDC7O00311 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC7O00311 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CDC7O00311 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC7O00311 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.65■□□□□ 0.74
CDC7O00311 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.65■□□□□ 0.74
CDC7O00311 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.65■□□□□ 0.74
CDC7O00311 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.65■□□□□ 0.74
CDC7O00311 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC7O00311 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC7O00311 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDC7O00311 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDC7O00311 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CDC7O00311 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDC7O00311 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDC7O00311 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.64■□□□□ 0.73
CDC7O00311 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.64■□□□□ 0.73
CDC7O00311 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.64■□□□□ 0.73
CDC7O00311 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.64■□□□□ 0.73
CDC7O00311 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CDC7O00311 RAP2CP1-201ENST00000605103 478 ntBASIC19.64■□□□□ 0.73
CDC7O00311 AL589743.5-201ENST00000616611 1050 ntBASIC19.64■□□□□ 0.73
CDC7O00311 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 KRT8P17-201ENST00000453110 1448 ntBASIC19.64■□□□□ 0.73
CDC7O00311 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.64■□□□□ 0.73
CDC7O00311 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.64■□□□□ 0.73
CDC7O00311 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.64■□□□□ 0.73
CDC7O00311 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC7O00311 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDC7O00311 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC7O00311 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC7O00311 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
CDC7O00311 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDC7O00311 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.63■□□□□ 0.73
CDC7O00311 AC133552.2-202ENST00000575694 574 ntBASIC19.63■□□□□ 0.73
CDC7O00311 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC7O00311 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC7O00311 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC7O00311 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC7O00311 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC7O00311 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC7O00311 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC7O00311 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC7O00311 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms