Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM88BA6NKF7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 RN7SL510P-201ENST00000581311 263 ntBASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 AP000692.2-201ENST00000608391 879 ntBASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 AC004263.2-201ENST00000617183 678 ntBASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM88BA6NKF7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 SLC25A1P2-201ENST00000430693 912 ntBASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 VENTXP5-201ENST00000523979 775 ntBASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 CR769767.2-201ENST00000622735 460 ntBASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
TMEM88BA6NKF7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 TSPY21P-201ENST00000433481 731 ntBASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 TSPY23P-201ENST00000440136 739 ntBASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 AC131212.4-201ENST00000623606 975 ntBASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMEM88BA6NKF7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 AC007663.1-201ENST00000438948 1240 ntBASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 AL136038.3-201ENST00000561909 1096 ntBASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TMEM88BA6NKF7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
TMEM88BA6NKF7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 ATP5G2P1-201ENST00000433580 426 ntBASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 AC140113.3-201ENST00000605663 199 ntBASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.45■■□□□ 1.34
TMEM88BA6NKF7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms