Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AL445250.1-203ENST00000641829 1535 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC018688.1-201ENST00000636528 1754 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 OR52K3P-202ENST00000641797 1729 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 THAP12P3-201ENST00000456373 2266 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AL035563.1-201ENST00000609087 1539 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 RNA5SP218-201ENST00000363188 109 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 RNU4-81P-201ENST00000363561 144 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 RPL24P7-201ENST00000399435 453 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 RBM22P7-201ENST00000421321 280 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 NPM1P30-201ENST00000425092 828 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC073900.1-201ENST00000429766 776 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 DBIL5P2-201ENST00000443827 253 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 CYCSP44-201ENST00000448560 313 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 RN7SL569P-201ENST00000494652 288 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 RN7SKP242-201ENST00000515967 289 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC012640.3-201ENST00000607847 430 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC211433.3-201ENST00000623770 375 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 AC130448.2-201ENST00000624082 374 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 OR6M2P-202ENST00000641780 2063 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.73□□□□□ -1.33
C9orf40Q8IXQ3 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 NPM1P31-201ENST00000399021 764 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.72□□□□□ -1.33
C9orf40Q8IXQ3 AC104698.1-201ENST00000435671 276 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms