Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 AC107058.1-201ENST00000513297 1384 ntBASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 AC005261.6-201ENST00000623072 1387 ntBASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 CDYLP1-201ENST00000419017 1458 ntBASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 AL022323.4-201ENST00000623980 13120 ntBASIC7.55□□□□□ -1.2
HMGB1P1B2RPK0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC127070.3-201ENST00000503695 3263 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 MTND5P23-201ENST00000430812 1655 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 OR11G2-201ENST00000357366 1038 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 MIR498-201ENST00000385134 124 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AL583835.2-203ENST00000407271 440 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 GAS8-AS1-201ENST00000408886 435 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 BCRP8-201ENST00000412037 255 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC096644.3-201ENST00000416788 338 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 REREP1Y-201ENST00000422655 198 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 REREP2Y-201ENST00000439103 200 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 RPS19P6-201ENST00000441327 433 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AL135924.1-201ENST00000446146 423 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC239798.3-201ENST00000454459 408 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AL137247.1-201ENST00000461502 764 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 DEFB109A-201ENST00000482450 265 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 RPS10P20-201ENST00000494130 463 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC107385.1-201ENST00000507985 778 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC146944.3-201ENST00000509969 371 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AL158819.1-201ENST00000514681 398 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC006927.1-201ENST00000544818 498 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 RN7SL138P-201ENST00000577405 287 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 RPL7L1P5-201ENST00000590816 738 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 GMFG-210ENST00000601387 497 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 SMARCE1P7-201ENST00000605515 485 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC080112.3-201ENST00000612552 880 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AC069222.1-201ENST00000608028 3360 ntBASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HMGB1P1B2RPK0 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 NAMPTP1-201ENST00000440465 2514 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL596244.1-201ENST00000567068 3779 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC090643.1-201ENST00000623600 3100 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 RBMX2P2-201ENST00000257020 946 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 KRTAP13-4-201ENST00000334068 797 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 RNA5SP218-201ENST00000363188 109 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms