Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 FLJ42393-201ENST00000623801 2270 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC007923.2-201ENST00000584218 1591 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 RNA5SP177-201ENST00000410122 107 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AL161626.1-201ENST00000441480 490 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 RPL23P10-201ENST00000468780 412 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 RN7SL392P-201ENST00000473024 299 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AL928654.1-201ENST00000476081 354 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC010409.2-201ENST00000505780 478 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 RPL10P18-201ENST00000519384 309 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AP001994.1-201ENST00000527539 826 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 MIR1273F-201ENST00000580581 99 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC011193.2-201ENST00000582638 367 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC061975.3-201ENST00000583209 244 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AL139317.4-201ENST00000605879 760 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 pRNA.9-201ENST00000618609 89 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AP002364.1-201ENST00000623330 3386 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 AC125232.1-201ENST00000452554 1408 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 QRSL1P3-201ENST00000552666 1316 ntBASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
C9orf40Q8IXQ3 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC022306.1-201ENST00000560489 1562 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC015871.4-201ENST00000624650 2260 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 SLC25A5P7-201ENST00000406156 896 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 GEMIN2P2-201ENST00000418195 715 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 CYP4F34P-201ENST00000425951 481 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC019080.2-201ENST00000453859 394 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC079594.1-201ENST00000489757 331 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 IGLVI-42-201ENST00000522485 381 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 NDUFA3P4-201ENST00000560814 250 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 RPS7P1-201ENST00000571702 585 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC024614.1-201ENST00000577546 307 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC015801.1-201ENST00000585651 153 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC005070.2-201ENST00000604391 260 ntBASIC6.74□□□□□ -1.33
C9orf40Q8IXQ3 AC078909.2-201ENST00000620584 398 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms