Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 RN7SKP63-201ENST00000363187 301 ntBASIC7.76□□□□□ -1.17
APOEP02649 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 SSX6-201ENST00000376932 562 ntBASIC7.76□□□□□ -1.17
APOEP02649 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.76□□□□□ -1.17
APOEP02649 RN7SKP131-201ENST00000410698 301 ntBASIC7.76□□□□□ -1.17
APOEP02649 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.76□□□□□ -1.17
APOEP02649 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.76□□□□□ -1.17
APOEP02649 AC005040.1-201ENST00000437783 482 ntBASIC7.76□□□□□ -1.17
APOEP02649 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.76□□□□□ -1.17
APOEP02649 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.76□□□□□ -1.17
APOEP02649 LIN28AP2-201ENST00000445283 458 ntBASIC7.76□□□□□ -1.17
APOEP02649 SS18L2P1-201ENST00000445923 213 ntBASIC7.76□□□□□ -1.17
APOEP02649 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC7.76□□□□□ -1.17
APOEP02649 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
APOEP02649 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.76□□□□□ -1.17
APOEP02649 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.76□□□□□ -1.17
APOEP02649 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.76□□□□□ -1.17
APOEP02649 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.76□□□□□ -1.17
APOEP02649 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.76□□□□□ -1.17
APOEP02649 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.76□□□□□ -1.17
APOEP02649 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.76□□□□□ -1.17
APOEP02649 AC008385.1-201ENST00000604421 355 ntBASIC7.76□□□□□ -1.17
APOEP02649 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC7.76□□□□□ -1.17
APOEP02649 SNORA43.5-201ENST00000631270 138 ntBASIC7.76□□□□□ -1.17
APOEP02649 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.76□□□□□ -1.17
APOEP02649 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.76□□□□□ -1.17
APOEP02649 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
APOEP02649 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.76□□□□□ -1.17
APOEP02649 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.76□□□□□ -1.17
APOEP02649 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.76□□□□□ -1.17
APOEP02649 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
APOEP02649 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
APOEP02649 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.75□□□□□ -1.17
APOEP02649 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 OR51A10P-201ENST00000307165 937 ntBASIC7.75□□□□□ -1.17
APOEP02649 RNA5SP260-201ENST00000363849 111 ntBASIC7.75□□□□□ -1.17
APOEP02649 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
APOEP02649 AC020983.1-201ENST00000417063 543 ntBASIC7.75□□□□□ -1.17
APOEP02649 PPIL1P1-201ENST00000423936 499 ntBASIC7.75□□□□□ -1.17
APOEP02649 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.75□□□□□ -1.17
APOEP02649 AC244505.2-201ENST00000435089 759 ntBASIC7.75□□□□□ -1.17
APOEP02649 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.75□□□□□ -1.17
APOEP02649 GTF2F2P2-201ENST00000445825 721 ntBASIC7.75□□□□□ -1.17
APOEP02649 AC015820.1-201ENST00000473882 321 ntBASIC7.75□□□□□ -1.17
APOEP02649 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.75□□□□□ -1.17
APOEP02649 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.75□□□□□ -1.17
APOEP02649 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.75□□□□□ -1.17
APOEP02649 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.75□□□□□ -1.17
APOEP02649 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.75□□□□□ -1.17
APOEP02649 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.75□□□□□ -1.17
APOEP02649 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.75□□□□□ -1.17
APOEP02649 AC106795.5-201ENST00000623288 454 ntBASIC7.75□□□□□ -1.17
APOEP02649 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
APOEP02649 AC233280.20-201ENST00000637412 416 ntBASIC7.75□□□□□ -1.17
APOEP02649 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
APOEP02649 TMEM75-201ENST00000624314 2165 ntBASIC7.75□□□□□ -1.17
APOEP02649 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
APOEP02649 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
APOEP02649 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
APOEP02649 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
APOEP02649 AC011008.2-201ENST00000624866 3352 ntBASIC7.74□□□□□ -1.17
APOEP02649 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC7.74□□□□□ -1.17
APOEP02649 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 NXT2-204ENST00000372107 937 ntTSL 3 BASIC7.74□□□□□ -1.17
APOEP02649 RN7SKP225-201ENST00000410405 352 ntBASIC7.74□□□□□ -1.17
APOEP02649 RPL34P19-201ENST00000415903 342 ntBASIC7.74□□□□□ -1.17
APOEP02649 EEF1GP7-201ENST00000422983 703 ntBASIC7.74□□□□□ -1.17
APOEP02649 VDAC1P2-201ENST00000423609 850 ntBASIC7.74□□□□□ -1.17
APOEP02649 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.74□□□□□ -1.17
APOEP02649 ST13P2-201ENST00000438916 1109 ntBASIC7.74□□□□□ -1.17
APOEP02649 TAAR3P-201ENST00000466706 1078 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms