Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 KYNUP2-201ENST00000582280 1329 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 RBMX2P2-201ENST00000257020 946 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 NPM1P14-201ENST00000343743 866 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 RNA5SP218-201ENST00000363188 109 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 MIR27A-201ENST00000385073 78 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AL139135.1-201ENST00000412675 209 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC013470.3-201ENST00000420252 1194 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AL354983.1-201ENST00000434580 906 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC244505.2-201ENST00000435089 759 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC013787.1-201ENST00000460165 307 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC008040.4-201ENST00000494834 768 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 RNU2-45P-201ENST00000516068 187 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 SDHCP4-201ENST00000532834 510 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC122134.1-202ENST00000569111 1201 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 MIR744-201ENST00000578242 98 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 RN7SL835P-201ENST00000579920 262 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC011193.2-201ENST00000582638 367 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AL512430.4-201ENST00000603085 613 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 U47924.1-201ENST00000606539 434 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 RN7SL778P-201ENST00000607160 297 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AL139123.1-201ENST00000612008 430 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC080112.3-201ENST00000612552 880 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC138627.1-204ENST00000641894 765 ntBASIC8.15□□□□□ -1.1
PGBD4Q96DM1 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PGBD4Q96DM1 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
PGBD4Q96DM1 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AC026464.2-201ENST00000567834 2421 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 MAPK10-347ENST00000641762 2856 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AL078621.1-201ENST00000272567 768 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 LIN28AP2-201ENST00000445283 458 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 SNORA35.1-201ENST00000458908 128 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 RPS4XP19-201ENST00000460237 736 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 OR4C1P-201ENST00000530880 937 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC8.14□□□□□ -1.11
PGBD4Q96DM1 NF1P12-201ENST00000549593 583 ntBASIC8.14□□□□□ -1.11
PGBD4Q96DM1 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms