Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 FTH1P5-201ENST00000425761 545 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.42□□□□□ -1.06
POLR2AP24928 RPL23P10-201ENST00000468780 412 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 PPIAP6-201ENST00000557078 499 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 AC026826.3-201ENST00000561747 158 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC8.42□□□□□ -1.06
POLR2AP24928 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.42□□□□□ -1.06
POLR2AP24928 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
POLR2AP24928 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 AC092279.2-201ENST00000623742 2189 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
POLR2AP24928 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.42□□□□□ -1.06
POLR2AP24928 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.42□□□□□ -1.06
POLR2AP24928 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.42□□□□□ -1.06
POLR2AP24928 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
POLR2AP24928 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 API5P1-201ENST00000424316 1510 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 AL139806.1-201ENST00000403057 1002 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
POLR2AP24928 OR6R1P-201ENST00000431838 940 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 AL590128.1-201ENST00000433407 286 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 MYL6P3-201ENST00000436904 432 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.42□□□□□ -1.06
POLR2AP24928 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 SCARNA6-201ENST00000515982 265 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.42□□□□□ -1.06
POLR2AP24928 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC8.42□□□□□ -1.06
POLR2AP24928 AC097381.3-201ENST00000608962 462 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 AP005329.3-201ENST00000609924 686 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 CASC19-212ENST00000641153 1287 ntBASIC8.42□□□□□ -1.06
POLR2AP24928 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
POLR2AP24928 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
POLR2AP24928 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.42□□□□□ -1.06
POLR2AP24928 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.41□□□□□ -1.06
POLR2AP24928 AC104825.2-201ENST00000505448 3249 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
POLR2AP24928 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.41□□□□□ -1.06
POLR2AP24928 AC234771.2-201ENST00000445718 597 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 PTMAP1-205ENST00000455552 325 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 PSMA6P2-201ENST00000457574 686 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.41□□□□□ -1.06
POLR2AP24928 AC008967.1-201ENST00000504843 163 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 RNA5SP318-201ENST00000516352 92 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC8.41□□□□□ -1.06
POLR2AP24928 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.41□□□□□ -1.06
POLR2AP24928 AC137695.2-201ENST00000603123 754 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.41□□□□□ -1.06
POLR2AP24928 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
POLR2AP24928 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
POLR2AP24928 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
POLR2AP24928 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
POLR2AP24928 QRSL1P1-201ENST00000400977 1540 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 AC018804.1-201ENST00000430381 618 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.41□□□□□ -1.06
POLR2AP24928 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.41□□□□□ -1.06
POLR2AP24928 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
POLR2AP24928 SNX29P2-204ENST00000603801 875 ntBASIC8.41□□□□□ -1.06
POLR2AP24928 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
POLR2AP24928 AC217777.1-201ENST00000570034 1471 ntBASIC8.4□□□□□ -1.06
POLR2AP24928 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
POLR2AP24928 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
POLR2AP24928 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.4□□□□□ -1.06
POLR2AP24928 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.4□□□□□ -1.06
POLR2AP24928 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.4□□□□□ -1.06
POLR2AP24928 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
POLR2AP24928 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
POLR2AP24928 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
POLR2AP24928 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.4□□□□□ -1.06
POLR2AP24928 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
POLR2AP24928 RNA5SP431-201ENST00000410312 120 ntBASIC8.4□□□□□ -1.06
POLR2AP24928 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.4□□□□□ -1.06
POLR2AP24928 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
POLR2AP24928 GAPDHP37-201ENST00000442317 968 ntBASIC8.4□□□□□ -1.06
POLR2AP24928 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.4□□□□□ -1.06
POLR2AP24928 RN7SL552P-201ENST00000462094 276 ntBASIC8.4□□□□□ -1.06
POLR2AP24928 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.4□□□□□ -1.06
POLR2AP24928 RN7SL37P-201ENST00000490461 307 ntBASIC8.4□□□□□ -1.06
POLR2AP24928 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
POLR2AP24928 AC090568.1-201ENST00000509499 856 ntBASIC8.4□□□□□ -1.06
POLR2AP24928 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
POLR2AP24928 RN7SKP196-201ENST00000516267 345 ntBASIC8.4□□□□□ -1.06
POLR2AP24928 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms