Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC6.85□□□□□ -1.31
NCK1P16333 AP004247.4-201ENST00000608484 942 ntBASIC6.85□□□□□ -1.31
NCK1P16333 AL022324.3-201ENST00000609330 747 ntBASIC6.85□□□□□ -1.31
NCK1P16333 AL451054.3-201ENST00000611115 776 ntBASIC6.85□□□□□ -1.31
NCK1P16333 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC6.85□□□□□ -1.31
NCK1P16333 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NCK1P16333 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.85□□□□□ -1.31
NCK1P16333 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NCK1P16333 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.85□□□□□ -1.31
NCK1P16333 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCK1P16333 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.85□□□□□ -1.31
NCK1P16333 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.85□□□□□ -1.31
NCK1P16333 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.85□□□□□ -1.31
NCK1P16333 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.84□□□□□ -1.31
NCK1P16333 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 RPL23P10-201ENST00000468780 412 ntBASIC6.84□□□□□ -1.31
NCK1P16333 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 ULK4P3-201ENST00000563895 440 ntBASIC6.84□□□□□ -1.31
NCK1P16333 ULK4P1-202ENST00000565174 503 ntBASIC6.84□□□□□ -1.31
NCK1P16333 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 AC009171.1-201ENST00000572673 266 ntBASIC6.84□□□□□ -1.31
NCK1P16333 AL049840.6-202ENST00000603373 279 ntBASIC6.84□□□□□ -1.31
NCK1P16333 AC108704.1-201ENST00000611714 744 ntBASIC6.84□□□□□ -1.31
NCK1P16333 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 FLII-230ENST00000628188 156 ntTSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC6.84□□□□□ -1.31
NCK1P16333 AL034408.1-201ENST00000637712 664 ntBASIC6.84□□□□□ -1.31
NCK1P16333 SMG7-216ENST00000638826 219 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.84□□□□□ -1.31
NCK1P16333 MROH3P-201ENST00000435735 2676 ntBASIC6.84□□□□□ -1.31
NCK1P16333 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 GTF2IP1-202ENST00000614592 2047 ntBASIC6.84□□□□□ -1.31
NCK1P16333 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NCK1P16333 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCK1P16333 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.84□□□□□ -1.32
NCK1P16333 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
NCK1P16333 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.84□□□□□ -1.32
NCK1P16333 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
NCK1P16333 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.84□□□□□ -1.32
NCK1P16333 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
NCK1P16333 KARSP2-201ENST00000415696 1639 ntBASIC6.83□□□□□ -1.32
NCK1P16333 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.83□□□□□ -1.32
NCK1P16333 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.83□□□□□ -1.32
NCK1P16333 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NCK1P16333 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
NCK1P16333 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NCK1P16333 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NCK1P16333 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NCK1P16333 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NCK1P16333 AC087045.3-201ENST00000623046 2468 ntBASIC6.83□□□□□ -1.32
NCK1P16333 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NCK1P16333 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms