Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NUCKS1P1-201ENST00000452067 703 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC005550.2-201ENST00000476382 318 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 OR52A4P-202ENST00000481634 799 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 OR52A4P-203ENST00000498233 1014 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 NPY6R-201ENST00000503807 1112 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC044860.3-201ENST00000559957 368 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 ADAD1P2-201ENST00000588476 646 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AF117829.2-201ENST00000619538 361 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 BX005040.2-201ENST00000620504 370 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC023818.2-201ENST00000623817 2304 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AL391380.1-201ENST00000439300 1432 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC022306.1-201ENST00000560489 1562 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 SNORA73B-201ENST00000363217 204 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 RNA5SP260-201ENST00000363849 111 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 SSX6-201ENST00000376932 562 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 MIR498-201ENST00000385134 124 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 RNU6-1176P-201ENST00000390955 107 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 RPSAP44-201ENST00000406712 884 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC123904.1-201ENST00000441072 368 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 RPL24P8-201ENST00000446071 474 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AL451074.4-201ENST00000447545 470 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC092570.2-201ENST00000452117 1143 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 OR7E62P-201ENST00000456741 477 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC089999.1-201ENST00000460336 374 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC018475.1-201ENST00000478358 465 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC008799.2-201ENST00000484429 647 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC111000.1-201ENST00000514545 713 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 RNU6-551P-201ENST00000516661 103 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC087257.2-201ENST00000538759 928 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 SNX29P2-204ENST00000603801 875 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC026979.4-201ENST00000606555 645 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC080112.3-201ENST00000612552 880 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC243830.2-201ENST00000618067 630 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC022919.1-201ENST00000624979 626 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AC104581.5-201ENST00000624171 7141 ntBASIC7.84□□□□□ -1.15
CDK5RAP1Q96SZ6 AL023806.3-201ENST00000638502 2704 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms