Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SUMO3P55854 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SUMO3P55854 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SUMO3P55854 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.93□□□□□ -1.3
SUMO3P55854 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 AL035563.1-201ENST00000609087 1539 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 RNA5SP297-201ENST00000391029 113 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 HNRNPCP2-201ENST00000399515 881 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AL589994.1-201ENST00000404962 340 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 PRELID1P2-201ENST00000407805 396 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 GYG1P2-201ENST00000426437 1006 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 NPM1P25-201ENST00000429734 854 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AC074367.1-201ENST00000438685 1125 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC018738.1-201ENST00000441378 210 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AC107983.1-201ENST00000442562 210 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 MORF4L1P4-201ENST00000450245 976 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.92□□□□□ -1.3
SUMO3P55854 MRPS21P1-201ENST00000453850 223 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.92□□□□□ -1.3
SUMO3P55854 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 AC092133.1-201ENST00000565828 719 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC040174.2-201ENST00000602701 465 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AP004247.4-201ENST00000608484 942 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AC084036.1-201ENST00000609190 508 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AP003068.4-201ENST00000623192 802 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 C18orf12-201ENST00000623329 537 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 CASC19-208ENST00000641056 1292 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 CASC19-227ENST00000641411 1285 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 AC119674.1-220ENST00000641502 1048 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC127502.2-201ENST00000602663 2351 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 TNFSF15-201ENST00000374044 2789 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.92□□□□□ -1.3
SUMO3P55854 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 FADS2P1-201ENST00000611807 1446 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SUMO3P55854 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SUMO3P55854 AC090132.1-201ENST00000524071 1480 ntBASIC6.92□□□□□ -1.3
SUMO3P55854 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.91□□□□□ -1.3
SUMO3P55854 AL161891.1-201ENST00000621575 4636 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.91□□□□□ -1.3
SUMO3P55854 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SUMO3P55854 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SUMO3P55854 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.91□□□□□ -1.3
SUMO3P55854 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.91□□□□□ -1.3
SUMO3P55854 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 RNU6-618P-201ENST00000363518 112 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms