Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC068134.3-201ENST00000513620 788 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX3Q99909 OR4A11P-201ENST00000529557 906 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.43□□□□□ -1.38
SSX3Q99909 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SSX3Q99909 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.43□□□□□ -1.38
SSX3Q99909 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC6.43□□□□□ -1.38
SSX3Q99909 DPPA3P2-202ENST00000557188 1219 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 IGHV1OR15-4-201ENST00000560037 348 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX3Q99909 MIR4793-201ENST00000577502 87 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 MIR4262-201ENST00000578394 54 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.43□□□□□ -1.38
SSX3Q99909 AF186192.2-204ENST00000581667 524 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 RPL23AP77-201ENST00000588044 463 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC6.43□□□□□ -1.38
SSX3Q99909 MIR6745-201ENST00000612694 127 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AC010538.1-201ENST00000615131 663 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 AC134981.1-201ENST00000628076 348 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SSX3Q99909 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 AL445250.1-203ENST00000641829 1535 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 AC007406.5-201ENST00000570140 3170 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 CCAT2-201ENST00000630920 1752 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SSX3Q99909 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX3Q99909 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX3Q99909 AC007938.1-201ENST00000562524 2902 ntBASIC6.43□□□□□ -1.38
SSX3Q99909 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX3Q99909 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSX3Q99909 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.42□□□□□ -1.38
SSX3Q99909 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSX3Q99909 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX3Q99909 AMELY-202ENST00000383036 621 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX3Q99909 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSX3Q99909 RNU6-316P-201ENST00000391027 107 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SSX3Q99909 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX3Q99909 RBMS1P1-201ENST00000417216 1156 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 ANKRD54P1-201ENST00000433115 471 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 OR5M13P-201ENST00000433944 937 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.42□□□□□ -1.38
SSX3Q99909 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.42□□□□□ -1.38
SSX3Q99909 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC6.42□□□□□ -1.38
SSX3Q99909 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX3Q99909 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.42□□□□□ -1.38
SSX3Q99909 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC6.42□□□□□ -1.38
SSX3Q99909 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC6.42□□□□□ -1.38
SSX3Q99909 RN7SL12P-201ENST00000473849 290 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SSX3Q99909 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX3Q99909 SDHCP4-201ENST00000532834 510 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.42□□□□□ -1.38
SSX3Q99909 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX3Q99909 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX3Q99909 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.42□□□□□ -1.38
SSX3Q99909 MT1L-202ENST00000566367 78 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 RBM22P13-201ENST00000569805 1244 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 PRR13P4-201ENST00000577786 421 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 RBM22P4-201ENST00000613117 1240 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 MIR6761-201ENST00000617899 72 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 AC005790.1-201ENST00000619774 450 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 AL157359.3-201ENST00000623771 217 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX3Q99909 MFSD8-234ENST00000641503 1082 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 SOCS5P4-201ENST00000454743 1566 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 MAPK10-319ENST00000641459 2542 ntBASIC6.42□□□□□ -1.38
SSX3Q99909 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX3Q99909 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX3Q99909 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms