Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 DDX10P2-201ENST00000417796 2614 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 TUBBP10-201ENST00000427668 1301 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AC090983.1-201ENST00000623426 3897 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AL136298.2-201ENST00000556497 1570 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 RN7SKP174-201ENST00000363803 330 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 LARP1P1-201ENST00000407692 292 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 PRELID1P2-201ENST00000407805 396 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AC127537.1-201ENST00000418183 748 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 RPSAP1-201ENST00000421328 880 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 NIP7P1-201ENST00000433227 512 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AC018892.2-201ENST00000457656 693 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL180P-201ENST00000466769 294 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL152P-201ENST00000484176 298 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AC090539.2-201ENST00000523425 671 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 MIR7162-201ENST00000611134 69 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AC002090.1-201ENST00000625000 2138 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AC119674.1-201ENST00000641611 1210 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 TRIM51HP-202ENST00000530412 1823 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AL008638.3-201ENST00000623027 5182 ntBASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
C9orf40Q8IXQ3 AL359922.2-201ENST00000581788 3017 ntBASIC6.84□□□□□ -1.32
C9orf40Q8IXQ3 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
C9orf40Q8IXQ3 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
C9orf40Q8IXQ3 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.32
C9orf40Q8IXQ3 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
C9orf40Q8IXQ3 AL096816.1-201ENST00000623300 2920 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RPL5P8-201ENST00000396820 815 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 SNORA3.1-201ENST00000408166 111 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AL390840.1-201ENST00000420303 988 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 EEF1GP7-201ENST00000422983 703 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 ELOBP4-201ENST00000423418 296 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RPL5P6-201ENST00000425640 886 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 FTH1P10-202ENST00000430907 550 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RPL5P27-201ENST00000437011 881 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC114755.1-201ENST00000453101 868 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC096922.1-201ENST00000461635 651 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 NDUFB4P1-201ENST00000462398 381 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RPS14P7-201ENST00000473701 448 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 MRPL49P1-201ENST00000505951 535 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms